Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DEFA4P12838 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DEFA4P12838 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.37■□□□□ 0.37
DEFA4P12838 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DEFA4P12838 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.37■□□□□ 0.37
DEFA4P12838 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DEFA4P12838 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DEFA4P12838 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
DEFA4P12838 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DEFA4P12838 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.37■□□□□ 0.37
DEFA4P12838 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.37■□□□□ 0.37
DEFA4P12838 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DEFA4P12838 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DEFA4P12838 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DEFA4P12838 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.36■□□□□ 0.37
DEFA4P12838 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.36■□□□□ 0.37
DEFA4P12838 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.36■□□□□ 0.37
DEFA4P12838 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.36■□□□□ 0.37
DEFA4P12838 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DEFA4P12838 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.36■□□□□ 0.37
DEFA4P12838 AC005229.4-201ENST00000610085 2198 ntBASIC17.36■□□□□ 0.37
DEFA4P12838 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DEFA4P12838 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DEFA4P12838 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DEFA4P12838 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DEFA4P12838 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
DEFA4P12838 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
DEFA4P12838 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 LINC01960-201ENST00000563759 1884 ntBASIC17.35■□□□□ 0.37
DEFA4P12838 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
DEFA4P12838 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.35■□□□□ 0.37
DEFA4P12838 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.35■□□□□ 0.37
DEFA4P12838 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
DEFA4P12838 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.35■□□□□ 0.37
DEFA4P12838 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DEFA4P12838 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.35■□□□□ 0.37
DEFA4P12838 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DEFA4P12838 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.35■□□□□ 0.37
DEFA4P12838 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.35■□□□□ 0.37
DEFA4P12838 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.34■□□□□ 0.37
DEFA4P12838 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DEFA4P12838 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DEFA4P12838 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DEFA4P12838 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DEFA4P12838 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.34■□□□□ 0.37
DEFA4P12838 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DEFA4P12838 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.34■□□□□ 0.37
DEFA4P12838 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.34■□□□□ 0.37
DEFA4P12838 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DEFA4P12838 AC073130.3-201ENST00000624389 2278 ntBASIC17.33■□□□□ 0.37
DEFA4P12838 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
DEFA4P12838 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.33■□□□□ 0.37
DEFA4P12838 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
DEFA4P12838 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DEFA4P12838 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
DEFA4P12838 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
DEFA4P12838 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DEFA4P12838 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DEFA4P12838 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DEFA4P12838 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.33■□□□□ 0.36
DEFA4P12838 SRD5A1P1-201ENST00000442297 786 ntBASIC17.33■□□□□ 0.36
DEFA4P12838 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DEFA4P12838 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DEFA4P12838 MIR3621-201ENST00000580529 85 ntBASIC17.33■□□□□ 0.36
DEFA4P12838 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.33■□□□□ 0.36
DEFA4P12838 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
DEFA4P12838 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DEFA4P12838 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.33■□□□□ 0.36
DEFA4P12838 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DEFA4P12838 AC010542.4-201ENST00000563151 1910 ntBASIC17.33■□□□□ 0.36
DEFA4P12838 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DEFA4P12838 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.32■□□□□ 0.36
DEFA4P12838 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.32■□□□□ 0.36
DEFA4P12838 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms