Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.72■■□□□ 1.07
MMP2P08253 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MMP2P08253 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP2P08253 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MMP2P08253 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP2P08253 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP2P08253 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
MMP2P08253 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP2P08253 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.72■■□□□ 1.07
MMP2P08253 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.72■■□□□ 1.07
MMP2P08253 AL034346.1-201ENST00000568244 1277 ntBASIC21.72■■□□□ 1.07
MMP2P08253 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP2P08253 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.72■■□□□ 1.07
MMP2P08253 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.72■■□□□ 1.07
MMP2P08253 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP2P08253 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MMP2P08253 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP2P08253 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
MMP2P08253 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
MMP2P08253 BX005040.4-201ENST00000637145 1518 ntBASIC21.71■■□□□ 1.07
MMP2P08253 AC010542.4-201ENST00000563151 1910 ntBASIC21.71■■□□□ 1.07
MMP2P08253 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP2P08253 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP2P08253 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.71■■□□□ 1.07
MMP2P08253 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.71■■□□□ 1.07
MMP2P08253 AL354811.1-201ENST00000610286 706 ntBASIC21.71■■□□□ 1.07
MMP2P08253 MIR6084-201ENST00000622012 110 ntBASIC21.71■■□□□ 1.07
MMP2P08253 AL358852.1-201ENST00000623174 1268 ntBASIC21.71■■□□□ 1.07
MMP2P08253 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
MMP2P08253 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MMP2P08253 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.71■■□□□ 1.07
MMP2P08253 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.7■■□□□ 1.06
MMP2P08253 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.7■■□□□ 1.06
MMP2P08253 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.7■■□□□ 1.06
MMP2P08253 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP2P08253 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
MMP2P08253 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.69■■□□□ 1.06
MMP2P08253 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.69■■□□□ 1.06
MMP2P08253 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP2P08253 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MMP2P08253 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP2P08253 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MMP2P08253 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.69■■□□□ 1.06
MMP2P08253 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.69■■□□□ 1.06
MMP2P08253 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP2P08253 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP2P08253 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP2P08253 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.69■■□□□ 1.06
MMP2P08253 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
MMP2P08253 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP2P08253 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP2P08253 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
MMP2P08253 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP2P08253 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
MMP2P08253 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.68■■□□□ 1.06
MMP2P08253 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.68■■□□□ 1.06
MMP2P08253 AP006587.3-201ENST00000525742 1516 ntBASIC21.68■■□□□ 1.06
MMP2P08253 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP2P08253 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.68■■□□□ 1.06
MMP2P08253 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
MMP2P08253 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP2P08253 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP2P08253 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP2P08253 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.67■■□□□ 1.06
MMP2P08253 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP2P08253 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.67■■□□□ 1.06
MMP2P08253 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
MMP2P08253 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP2P08253 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP2P08253 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP2P08253 TPRG1LP1-201ENST00000598702 760 ntBASIC21.67■■□□□ 1.06
MMP2P08253 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.67■■□□□ 1.06
MMP2P08253 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP2P08253 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP2P08253 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP2P08253 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.67■■□□□ 1.06
MMP2P08253 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP2P08253 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.66■■□□□ 1.06
MMP2P08253 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.66■■□□□ 1.06
MMP2P08253 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP2P08253 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.66■■□□□ 1.06
MMP2P08253 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP2P08253 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP2P08253 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP2P08253 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP2P08253 FBXW4P1-201ENST00000426721 2239 ntBASIC21.65■■□□□ 1.06
MMP2P08253 AC009237.3-201ENST00000393279 1427 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms