Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.98■■□□□ 1.43
TPM3P06753 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.98■■□□□ 1.43
TPM3P06753 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.98■■□□□ 1.43
TPM3P06753 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.98■■□□□ 1.43
TPM3P06753 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
TPM3P06753 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
TPM3P06753 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.98■■□□□ 1.43
TPM3P06753 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.98■■□□□ 1.43
TPM3P06753 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.98■■□□□ 1.43
TPM3P06753 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TPM3P06753 YBX1P4-201ENST00000392794 808 ntBASIC23.97■■□□□ 1.43
TPM3P06753 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
TPM3P06753 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TPM3P06753 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.97■■□□□ 1.43
TPM3P06753 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TPM3P06753 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TPM3P06753 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.97■■□□□ 1.43
TPM3P06753 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TPM3P06753 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TPM3P06753 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TPM3P06753 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TPM3P06753 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TPM3P06753 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.96■■□□□ 1.43
TPM3P06753 AF106564.1-201ENST00000607058 2553 ntBASIC23.96■■□□□ 1.43
TPM3P06753 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.96■■□□□ 1.43
TPM3P06753 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.96■■□□□ 1.43
TPM3P06753 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.96■■□□□ 1.43
TPM3P06753 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TPM3P06753 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.96■■□□□ 1.43
TPM3P06753 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.96■■□□□ 1.43
TPM3P06753 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TPM3P06753 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TPM3P06753 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TPM3P06753 AC004687.1-201ENST00000579003 1625 ntBASIC23.95■■□□□ 1.43
TPM3P06753 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TPM3P06753 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.95■■□□□ 1.43
TPM3P06753 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.95■■□□□ 1.42
TPM3P06753 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TPM3P06753 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.95■■□□□ 1.42
TPM3P06753 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
TPM3P06753 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TPM3P06753 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
TPM3P06753 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TPM3P06753 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.95■■□□□ 1.42
TPM3P06753 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.95■■□□□ 1.42
TPM3P06753 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.95■■□□□ 1.42
TPM3P06753 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.95■■□□□ 1.42
TPM3P06753 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.95■■□□□ 1.42
TPM3P06753 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
TPM3P06753 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.95■■□□□ 1.42
TPM3P06753 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TPM3P06753 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.95■■□□□ 1.42
TPM3P06753 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.94■■□□□ 1.42
TPM3P06753 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TPM3P06753 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TPM3P06753 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TPM3P06753 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TPM3P06753 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TPM3P06753 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TPM3P06753 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TPM3P06753 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
TPM3P06753 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.93■■□□□ 1.42
TPM3P06753 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.93■■□□□ 1.42
TPM3P06753 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
TPM3P06753 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.93■■□□□ 1.42
TPM3P06753 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TPM3P06753 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TPM3P06753 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TPM3P06753 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TPM3P06753 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.92■■□□□ 1.42
TPM3P06753 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TPM3P06753 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
TPM3P06753 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TPM3P06753 AC103724.3-201ENST00000564481 992 ntBASIC23.92■■□□□ 1.42
TPM3P06753 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms