Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHGBP05060 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.97■■□□□ 1.75
CHGBP05060 AL117328.2-201ENST00000624617 1940 ntBASIC25.96■■□□□ 1.75
CHGBP05060 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
CHGBP05060 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHGBP05060 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CHGBP05060 AL162430.1-201ENST00000480705 870 ntBASIC25.96■■□□□ 1.75
CHGBP05060 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.96■■□□□ 1.75
CHGBP05060 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.96■■□□□ 1.75
CHGBP05060 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHGBP05060 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CHGBP05060 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHGBP05060 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.96■■□□□ 1.75
CHGBP05060 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CHGBP05060 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.95■■□□□ 1.75
CHGBP05060 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CHGBP05060 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CHGBP05060 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CHGBP05060 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHGBP05060 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.95■■□□□ 1.74
CHGBP05060 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHGBP05060 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.95■■□□□ 1.74
CHGBP05060 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.95■■□□□ 1.74
CHGBP05060 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CHGBP05060 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.95■■□□□ 1.74
CHGBP05060 KRT18P14-201ENST00000534205 1250 ntBASIC25.95■■□□□ 1.74
CHGBP05060 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHGBP05060 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.95■■□□□ 1.74
CHGBP05060 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CHGBP05060 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CHGBP05060 AC242852.2-201ENST00000615738 1807 ntBASIC25.95■■□□□ 1.74
CHGBP05060 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHGBP05060 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
CHGBP05060 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHGBP05060 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHGBP05060 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
CHGBP05060 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.94■■□□□ 1.74
CHGBP05060 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHGBP05060 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
CHGBP05060 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
CHGBP05060 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.94■■□□□ 1.74
CHGBP05060 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHGBP05060 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHGBP05060 LINC02228-203ENST00000641970 1355 ntBASIC25.94■■□□□ 1.74
CHGBP05060 AC005224.4-201ENST00000583262 1652 ntBASIC25.93■■□□□ 1.74
CHGBP05060 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHGBP05060 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHGBP05060 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
CHGBP05060 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.93■■□□□ 1.74
CHGBP05060 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.93■■□□□ 1.74
CHGBP05060 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHGBP05060 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CHGBP05060 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHGBP05060 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.93■■□□□ 1.74
CHGBP05060 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CHGBP05060 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.93■■□□□ 1.74
CHGBP05060 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHGBP05060 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CHGBP05060 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CHGBP05060 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHGBP05060 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
CHGBP05060 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.92■■□□□ 1.74
CHGBP05060 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CHGBP05060 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.92■■□□□ 1.74
CHGBP05060 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
CHGBP05060 AC055733.4-201ENST00000638462 1354 ntBASIC25.92■■□□□ 1.74
CHGBP05060 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CHGBP05060 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.92■■□□□ 1.74
CHGBP05060 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHGBP05060 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHGBP05060 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.91■■□□□ 1.74
CHGBP05060 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.91■■□□□ 1.74
CHGBP05060 ECEL1P1-201ENST00000373592 1742 ntBASIC25.91■■□□□ 1.74
CHGBP05060 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHGBP05060 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.91■■□□□ 1.74
CHGBP05060 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHGBP05060 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHGBP05060 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
CHGBP05060 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHGBP05060 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHGBP05060 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHGBP05060 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHGBP05060 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
CHGBP05060 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHGBP05060 AC092053.2-201ENST00000640557 1818 ntBASIC25.91■■□□□ 1.74
CHGBP05060 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHGBP05060 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHGBP05060 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHGBP05060 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHGBP05060 KRT18P5-201ENST00000436075 1291 ntBASIC25.9■■□□□ 1.74
CHGBP05060 MIR5787-201ENST00000611784 55 ntBASIC25.9■■□□□ 1.74
CHGBP05060 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.9■■□□□ 1.74
CHGBP05060 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHGBP05060 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.9■■□□□ 1.74
CHGBP05060 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHGBP05060 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.9■■□□□ 1.74
CHGBP05060 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
CHGBP05060 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CHGBP05060 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
CHGBP05060 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms