Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL4A1P02462 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.56■■□□□ 1.84
COL4A1P02462 AL121832.2-201ENST00000610979 668 ntBASIC26.56■■□□□ 1.84
COL4A1P02462 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
COL4A1P02462 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL4A1P02462 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.55■■□□□ 1.84
COL4A1P02462 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL4A1P02462 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL4A1P02462 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.55■■□□□ 1.84
COL4A1P02462 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.55■■□□□ 1.84
COL4A1P02462 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL4A1P02462 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
COL4A1P02462 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.54■■□□□ 1.84
COL4A1P02462 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
COL4A1P02462 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL4A1P02462 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.54■■□□□ 1.84
COL4A1P02462 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
COL4A1P02462 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL4A1P02462 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL4A1P02462 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.54■■□□□ 1.84
COL4A1P02462 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL4A1P02462 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.54■■□□□ 1.84
COL4A1P02462 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.54■■□□□ 1.84
COL4A1P02462 AC010536.3-201ENST00000620306 533 ntBASIC26.54■■□□□ 1.84
COL4A1P02462 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL4A1P02462 AC137767.1-201ENST00000602918 1920 ntBASIC26.53■■□□□ 1.84
COL4A1P02462 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.53■■□□□ 1.84
COL4A1P02462 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL4A1P02462 CYP2T1P-201ENST00000432607 1285 ntBASIC26.53■■□□□ 1.84
COL4A1P02462 AC083906.2-201ENST00000511578 360 ntBASIC26.53■■□□□ 1.84
COL4A1P02462 OR7E47P-201ENST00000546390 1422 ntBASIC26.53■■□□□ 1.84
COL4A1P02462 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL4A1P02462 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL4A1P02462 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.52■■□□□ 1.84
COL4A1P02462 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL4A1P02462 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL4A1P02462 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.52■■□□□ 1.84
COL4A1P02462 AC007322.1-201ENST00000426983 750 ntBASIC26.52■■□□□ 1.84
COL4A1P02462 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL4A1P02462 AC069152.1-201ENST00000438030 544 ntBASIC26.52■■□□□ 1.84
COL4A1P02462 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.52■■□□□ 1.84
COL4A1P02462 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
COL4A1P02462 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL4A1P02462 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26.52■■□□□ 1.84
COL4A1P02462 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL4A1P02462 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.51■■□□□ 1.83
COL4A1P02462 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.51■■□□□ 1.83
COL4A1P02462 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.51■■□□□ 1.83
COL4A1P02462 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.51■■□□□ 1.83
COL4A1P02462 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL4A1P02462 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.51■■□□□ 1.83
COL4A1P02462 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL4A1P02462 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL4A1P02462 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
COL4A1P02462 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
COL4A1P02462 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
COL4A1P02462 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
COL4A1P02462 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.5■■□□□ 1.83
COL4A1P02462 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A1P02462 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.5■■□□□ 1.83
COL4A1P02462 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A1P02462 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
COL4A1P02462 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.5■■□□□ 1.83
COL4A1P02462 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
COL4A1P02462 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
COL4A1P02462 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.5■■□□□ 1.83
COL4A1P02462 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A1P02462 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A1P02462 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A1P02462 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A1P02462 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.5■■□□□ 1.83
COL4A1P02462 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.5■■□□□ 1.83
COL4A1P02462 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A1P02462 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.5■■□□□ 1.83
COL4A1P02462 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.49■■□□□ 1.83
COL4A1P02462 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL4A1P02462 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.49■■□□□ 1.83
COL4A1P02462 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL4A1P02462 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.49■■□□□ 1.83
COL4A1P02462 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.49■■□□□ 1.83
COL4A1P02462 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.49■■□□□ 1.83
COL4A1P02462 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL4A1P02462 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
COL4A1P02462 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.48■■□□□ 1.83
COL4A1P02462 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A1P02462 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.48■■□□□ 1.83
COL4A1P02462 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.48■■□□□ 1.83
COL4A1P02462 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A1P02462 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A1P02462 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.47■■□□□ 1.83
COL4A1P02462 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
COL4A1P02462 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
COL4A1P02462 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A1P02462 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A1P02462 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A1P02462 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A1P02462 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
COL4A1P02462 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A1P02462 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A1P02462 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms