Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
IFNA1P01562 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
IFNA1P01562 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.98■□□□□ 0.31
IFNA1P01562 AC007029.1-201ENST00000604183 313 ntBASIC16.98■□□□□ 0.31
IFNA1P01562 CR559946.2-201ENST00000623684 991 ntBASIC16.98■□□□□ 0.31
IFNA1P01562 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
IFNA1P01562 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
IFNA1P01562 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFNA1P01562 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.98■□□□□ 0.31
IFNA1P01562 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.97■□□□□ 0.31
IFNA1P01562 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.97■□□□□ 0.31
IFNA1P01562 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFNA1P01562 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
IFNA1P01562 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
IFNA1P01562 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
IFNA1P01562 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
IFNA1P01562 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFNA1P01562 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFNA1P01562 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.97■□□□□ 0.31
IFNA1P01562 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFNA1P01562 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.97■□□□□ 0.31
IFNA1P01562 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
IFNA1P01562 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
IFNA1P01562 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
IFNA1P01562 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
IFNA1P01562 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFNA1P01562 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
IFNA1P01562 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
IFNA1P01562 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.97■□□□□ 0.31
IFNA1P01562 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
IFNA1P01562 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IFNA1P01562 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFNA1P01562 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFNA1P01562 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFNA1P01562 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.96■□□□□ 0.31
IFNA1P01562 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.96■□□□□ 0.31
IFNA1P01562 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFNA1P01562 RPS2P7-201ENST00000447334 885 ntBASIC16.96■□□□□ 0.31
IFNA1P01562 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.96■□□□□ 0.31
IFNA1P01562 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
IFNA1P01562 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IFNA1P01562 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFNA1P01562 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.96■□□□□ 0.31
IFNA1P01562 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFNA1P01562 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFNA1P01562 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IFNA1P01562 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IFNA1P01562 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
IFNA1P01562 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IFNA1P01562 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
IFNA1P01562 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNA1P01562 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
IFNA1P01562 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNA1P01562 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNA1P01562 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.95■□□□□ 0.3
IFNA1P01562 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNA1P01562 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNA1P01562 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
IFNA1P01562 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
IFNA1P01562 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.95■□□□□ 0.3
IFNA1P01562 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNA1P01562 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNA1P01562 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNA1P01562 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.95■□□□□ 0.3
IFNA1P01562 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNA1P01562 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
IFNA1P01562 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNA1P01562 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
IFNA1P01562 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
IFNA1P01562 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
IFNA1P01562 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
IFNA1P01562 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
IFNA1P01562 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
IFNA1P01562 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
IFNA1P01562 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.94■□□□□ 0.3
IFNA1P01562 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNA1P01562 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNA1P01562 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IFNA1P01562 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNA1P01562 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNA1P01562 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IFNA1P01562 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNA1P01562 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms