Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTN3O95197 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.61■■□□□ 1.21
RTN3O95197 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.61■■□□□ 1.21
RTN3O95197 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.61■■□□□ 1.21
RTN3O95197 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.61■■□□□ 1.21
RTN3O95197 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTN3O95197 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTN3O95197 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTN3O95197 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RTN3O95197 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTN3O95197 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.6■■□□□ 1.21
RTN3O95197 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.6■■□□□ 1.21
RTN3O95197 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.6■■□□□ 1.21
RTN3O95197 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.6■■□□□ 1.21
RTN3O95197 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.6■■□□□ 1.21
RTN3O95197 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTN3O95197 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.6■■□□□ 1.21
RTN3O95197 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTN3O95197 AP004607.4-201ENST00000530158 1459 ntBASIC22.6■■□□□ 1.21
RTN3O95197 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTN3O95197 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTN3O95197 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTN3O95197 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTN3O95197 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTN3O95197 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.59■■□□□ 1.21
RTN3O95197 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RTN3O95197 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.59■■□□□ 1.21
RTN3O95197 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.59■■□□□ 1.21
RTN3O95197 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.59■■□□□ 1.21
RTN3O95197 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.59■■□□□ 1.21
RTN3O95197 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.59■■□□□ 1.21
RTN3O95197 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RTN3O95197 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
RTN3O95197 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RTN3O95197 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTN3O95197 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTN3O95197 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTN3O95197 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.58■■□□□ 1.21
RTN3O95197 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RTN3O95197 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RTN3O95197 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTN3O95197 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTN3O95197 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.58■■□□□ 1.21
RTN3O95197 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTN3O95197 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTN3O95197 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.58■■□□□ 1.21
RTN3O95197 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RTN3O95197 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTN3O95197 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
RTN3O95197 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.58■■□□□ 1.2
RTN3O95197 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
RTN3O95197 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 AC004854.2-201ENST00000608450 1441 ntBASIC22.57■■□□□ 1.2
RTN3O95197 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.57■■□□□ 1.2
RTN3O95197 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.57■■□□□ 1.2
RTN3O95197 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.57■■□□□ 1.2
RTN3O95197 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.57■■□□□ 1.2
RTN3O95197 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.57■■□□□ 1.2
RTN3O95197 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 AC139530.1-201ENST00000575312 1977 ntBASIC22.57■■□□□ 1.2
RTN3O95197 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.57■■□□□ 1.2
RTN3O95197 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.57■■□□□ 1.2
RTN3O95197 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.57■■□□□ 1.2
RTN3O95197 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTN3O95197 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTN3O95197 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.56■■□□□ 1.2
RTN3O95197 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTN3O95197 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTN3O95197 AC055733.4-201ENST00000638462 1354 ntBASIC22.56■■□□□ 1.2
RTN3O95197 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTN3O95197 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTN3O95197 KRT19P1-201ENST00000405746 1186 ntBASIC22.56■■□□□ 1.2
RTN3O95197 KRT18P61-201ENST00000585825 1298 ntBASIC22.56■■□□□ 1.2
RTN3O95197 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTN3O95197 AL137784.2-201ENST00000607332 1000 ntBASIC22.56■■□□□ 1.2
RTN3O95197 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTN3O95197 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTN3O95197 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTN3O95197 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTN3O95197 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN3O95197 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTN3O95197 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN3O95197 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN3O95197 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
RTN3O95197 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTN3O95197 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.55■■□□□ 1.2
RTN3O95197 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.55■■□□□ 1.2
RTN3O95197 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.55■■□□□ 1.2
RTN3O95197 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.55■■□□□ 1.2
RTN3O95197 IKBKGP1-201ENST00000612193 1073 ntBASIC22.55■■□□□ 1.2
RTN3O95197 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms