Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CSPG5O95196 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CSPG5O95196 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CSPG5O95196 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CSPG5O95196 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CSPG5O95196 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CSPG5O95196 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.06■■□□□ 1.28
CSPG5O95196 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.06■■□□□ 1.28
CSPG5O95196 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CSPG5O95196 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CSPG5O95196 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CSPG5O95196 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CSPG5O95196 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CSPG5O95196 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CSPG5O95196 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CSPG5O95196 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.05■■□□□ 1.28
CSPG5O95196 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CSPG5O95196 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CSPG5O95196 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CSPG5O95196 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
CSPG5O95196 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.05■■□□□ 1.28
CSPG5O95196 AF201337.1-201ENST00000520239 748 ntBASIC23.05■■□□□ 1.28
CSPG5O95196 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CSPG5O95196 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.05■■□□□ 1.28
CSPG5O95196 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.05■■□□□ 1.28
CSPG5O95196 AC008687.6-201ENST00000596318 630 ntBASIC23.05■■□□□ 1.28
CSPG5O95196 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CSPG5O95196 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CSPG5O95196 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CSPG5O95196 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CSPG5O95196 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSPG5O95196 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSPG5O95196 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CSPG5O95196 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CSPG5O95196 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.04■■□□□ 1.28
CSPG5O95196 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.04■■□□□ 1.28
CSPG5O95196 RNA5SP413-201ENST00000516373 109 ntBASIC23.04■■□□□ 1.28
CSPG5O95196 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.04■■□□□ 1.28
CSPG5O95196 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.04■■□□□ 1.28
CSPG5O95196 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.04■■□□□ 1.28
CSPG5O95196 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CSPG5O95196 AC009237.3-201ENST00000393279 1427 ntBASIC23.04■■□□□ 1.28
CSPG5O95196 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSPG5O95196 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSPG5O95196 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CSPG5O95196 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSPG5O95196 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CSPG5O95196 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSPG5O95196 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CSPG5O95196 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.03■■□□□ 1.28
CSPG5O95196 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CSPG5O95196 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.03■■□□□ 1.28
CSPG5O95196 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.02■■□□□ 1.28
CSPG5O95196 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.02■■□□□ 1.28
CSPG5O95196 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.02■■□□□ 1.28
CSPG5O95196 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.02■■□□□ 1.28
CSPG5O95196 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSPG5O95196 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.02■■□□□ 1.28
CSPG5O95196 CNN2P6-201ENST00000439038 900 ntBASIC23.02■■□□□ 1.28
CSPG5O95196 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CSPG5O95196 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.02■■□□□ 1.28
CSPG5O95196 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.02■■□□□ 1.28
CSPG5O95196 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.02■■□□□ 1.28
CSPG5O95196 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CSPG5O95196 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
CSPG5O95196 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.02■■□□□ 1.28
CSPG5O95196 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.02■■□□□ 1.28
CSPG5O95196 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.01■■□□□ 1.27
CSPG5O95196 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CSPG5O95196 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.01■■□□□ 1.27
CSPG5O95196 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSPG5O95196 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSPG5O95196 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSPG5O95196 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
CSPG5O95196 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSPG5O95196 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CSPG5O95196 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CSPG5O95196 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSPG5O95196 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.01■■□□□ 1.27
CSPG5O95196 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CSPG5O95196 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.01■■□□□ 1.27
CSPG5O95196 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.01■■□□□ 1.27
CSPG5O95196 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.01■■□□□ 1.27
CSPG5O95196 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CSPG5O95196 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CSPG5O95196 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CSPG5O95196 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CSPG5O95196 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
CSPG5O95196 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23■■□□□ 1.27
CSPG5O95196 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
CSPG5O95196 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CSPG5O95196 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23■■□□□ 1.27
CSPG5O95196 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23■■□□□ 1.27
CSPG5O95196 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23■■□□□ 1.27
CSPG5O95196 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23■■□□□ 1.27
CSPG5O95196 AC133041.1-202ENST00000642053 222 ntBASIC23■■□□□ 1.27
CSPG5O95196 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23■■□□□ 1.27
CSPG5O95196 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23■■□□□ 1.27
CSPG5O95196 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CSPG5O95196 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms