Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCGO76070 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.49□□□□□ -0.09
SNCGO76070 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SNCGO76070 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.49□□□□□ -0.09
SNCGO76070 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC14.49□□□□□ -0.09
SNCGO76070 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SNCGO76070 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.49□□□□□ -0.09
SNCGO76070 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SNCGO76070 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.49□□□□□ -0.09
SNCGO76070 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
SNCGO76070 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.49□□□□□ -0.09
SNCGO76070 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.49□□□□□ -0.09
SNCGO76070 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SNCGO76070 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNCGO76070 LINC01521-201ENST00000504184 1943 ntBASIC14.49□□□□□ -0.09
SNCGO76070 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.48□□□□□ -0.09
SNCGO76070 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SNCGO76070 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.48□□□□□ -0.09
SNCGO76070 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.48□□□□□ -0.09
SNCGO76070 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.48□□□□□ -0.09
SNCGO76070 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNCGO76070 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.48□□□□□ -0.09
SNCGO76070 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SNCGO76070 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SNCGO76070 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC14.47□□□□□ -0.09
SNCGO76070 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.47□□□□□ -0.09
SNCGO76070 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC14.47□□□□□ -0.09
SNCGO76070 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.47□□□□□ -0.09
SNCGO76070 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCGO76070 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.46□□□□□ -0.09
SNCGO76070 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SNCGO76070 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCGO76070 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNCGO76070 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SNCGO76070 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNCGO76070 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCGO76070 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCGO76070 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCGO76070 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
SNCGO76070 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCGO76070 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCGO76070 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
SNCGO76070 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC14.46□□□□□ -0.09
SNCGO76070 MIR3665-201ENST00000578708 105 ntBASIC14.46□□□□□ -0.09
SNCGO76070 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNCGO76070 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNCGO76070 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNCGO76070 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNCGO76070 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
SNCGO76070 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNCGO76070 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SNCGO76070 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNCGO76070 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
SNCGO76070 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.46□□□□□ -0.1
SNCGO76070 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
SNCGO76070 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNCGO76070 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNCGO76070 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms