Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM3O75382 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM3O75382 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM3O75382 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM3O75382 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM3O75382 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM3O75382 AC097381.1-201ENST00000429019 1296 ntBASIC19.93■□□□□ 0.78
TRIM3O75382 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM3O75382 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM3O75382 AC012414.1-201ENST00000556676 535 ntBASIC19.93■□□□□ 0.78
TRIM3O75382 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.93■□□□□ 0.78
TRIM3O75382 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM3O75382 AL354811.1-201ENST00000610286 706 ntBASIC19.93■□□□□ 0.78
TRIM3O75382 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM3O75382 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM3O75382 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM3O75382 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM3O75382 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM3O75382 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM3O75382 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM3O75382 ECEL1P1-201ENST00000373592 1742 ntBASIC19.93■□□□□ 0.78
TRIM3O75382 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM3O75382 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM3O75382 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM3O75382 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM3O75382 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM3O75382 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM3O75382 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM3O75382 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM3O75382 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
TRIM3O75382 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRIM3O75382 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM3O75382 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.92■□□□□ 0.78
TRIM3O75382 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
TRIM3O75382 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM3O75382 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM3O75382 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM3O75382 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM3O75382 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM3O75382 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM3O75382 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRIM3O75382 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM3O75382 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM3O75382 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM3O75382 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM3O75382 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM3O75382 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM3O75382 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM3O75382 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM3O75382 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
TRIM3O75382 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM3O75382 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRIM3O75382 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM3O75382 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM3O75382 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM3O75382 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM3O75382 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM3O75382 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM3O75382 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRIM3O75382 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM3O75382 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM3O75382 AC027612.3-201ENST00000413684 1047 ntBASIC19.9■□□□□ 0.78
TRIM3O75382 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM3O75382 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM3O75382 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.9■□□□□ 0.78
TRIM3O75382 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM3O75382 AC105233.4-201ENST00000642045 216 ntBASIC19.9■□□□□ 0.78
TRIM3O75382 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
TRIM3O75382 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM3O75382 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM3O75382 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM3O75382 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRIM3O75382 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRIM3O75382 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM3O75382 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM3O75382 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM3O75382 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM3O75382 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM3O75382 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM3O75382 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM3O75382 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM3O75382 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.89■□□□□ 0.77
TRIM3O75382 GUSBP5-202ENST00000510805 1989 ntBASIC19.89■□□□□ 0.77
TRIM3O75382 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM3O75382 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM3O75382 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM3O75382 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM3O75382 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM3O75382 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM3O75382 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRIM3O75382 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM3O75382 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM3O75382 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRIM3O75382 OXCT2P1-201ENST00000447263 1535 ntBASIC19.88■□□□□ 0.77
TRIM3O75382 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM3O75382 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM3O75382 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM3O75382 MIR6084-201ENST00000622012 110 ntBASIC19.88■□□□□ 0.77
TRIM3O75382 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM3O75382 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms