Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCN1O60741 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
HCN1O60741 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCN1O60741 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.99■□□□□ 0.79
HCN1O60741 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.99■□□□□ 0.79
HCN1O60741 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HCN1O60741 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HCN1O60741 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HCN1O60741 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
HCN1O60741 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
HCN1O60741 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HCN1O60741 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HCN1O60741 AC010525.1-201ENST00000585559 441 ntBASIC19.98■□□□□ 0.79
HCN1O60741 AL358852.1-201ENST00000623174 1268 ntBASIC19.98■□□□□ 0.79
HCN1O60741 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HCN1O60741 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
HCN1O60741 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HCN1O60741 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.98■□□□□ 0.79
HCN1O60741 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HCN1O60741 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HCN1O60741 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HCN1O60741 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HCN1O60741 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HCN1O60741 MIR572-201ENST00000384983 95 ntBASIC19.97■□□□□ 0.79
HCN1O60741 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.97■□□□□ 0.79
HCN1O60741 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HCN1O60741 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HCN1O60741 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.97■□□□□ 0.79
HCN1O60741 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.97■□□□□ 0.79
HCN1O60741 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HCN1O60741 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HCN1O60741 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HCN1O60741 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.97■□□□□ 0.79
HCN1O60741 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HCN1O60741 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HCN1O60741 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HCN1O60741 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HCN1O60741 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HCN1O60741 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HCN1O60741 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
HCN1O60741 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HCN1O60741 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.96■□□□□ 0.79
HCN1O60741 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HCN1O60741 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
HCN1O60741 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HCN1O60741 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.96■□□□□ 0.79
HCN1O60741 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.96■□□□□ 0.79
HCN1O60741 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HCN1O60741 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.96■□□□□ 0.79
HCN1O60741 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HCN1O60741 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HCN1O60741 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.96■□□□□ 0.79
HCN1O60741 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HCN1O60741 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HCN1O60741 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HCN1O60741 AC080038.3-201ENST00000623346 1952 ntBASIC19.95■□□□□ 0.78
HCN1O60741 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HCN1O60741 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HCN1O60741 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HCN1O60741 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HCN1O60741 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HCN1O60741 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HCN1O60741 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.95■□□□□ 0.78
HCN1O60741 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HCN1O60741 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HCN1O60741 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HCN1O60741 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.95■□□□□ 0.78
HCN1O60741 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HCN1O60741 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
HCN1O60741 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.95■□□□□ 0.78
HCN1O60741 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.95■□□□□ 0.78
HCN1O60741 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HCN1O60741 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HCN1O60741 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 SLC25A24-204ENST00000569674 2357 ntBASIC19.94■□□□□ 0.78
HCN1O60741 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.94■□□□□ 0.78
HCN1O60741 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HCN1O60741 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.94■□□□□ 0.78
HCN1O60741 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.94■□□□□ 0.78
HCN1O60741 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.94■□□□□ 0.78
HCN1O60741 AC087623.3-201ENST00000607047 1098 ntBASIC19.94■□□□□ 0.78
HCN1O60741 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.94■□□□□ 0.78
HCN1O60741 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 C11orf96-202ENST00000528572 1834 ntBASIC19.94■□□□□ 0.78
HCN1O60741 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.94■□□□□ 0.78
HCN1O60741 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.94■□□□□ 0.78
HCN1O60741 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.94■□□□□ 0.78
HCN1O60741 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HCN1O60741 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
HCN1O60741 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HCN1O60741 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCN1O60741 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms