Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH7O60245 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH7O60245 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
PCDH7O60245 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH7O60245 BX842568.3-201ENST00000418104 571 ntBASIC20.49■□□□□ 0.87
PCDH7O60245 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.49■□□□□ 0.87
PCDH7O60245 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH7O60245 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PCDH7O60245 AL137060.1-201ENST00000618151 2648 ntBASIC20.49■□□□□ 0.87
PCDH7O60245 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
PCDH7O60245 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH7O60245 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH7O60245 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH7O60245 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH7O60245 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH7O60245 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH7O60245 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH7O60245 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH7O60245 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PCDH7O60245 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH7O60245 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDH7O60245 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH7O60245 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH7O60245 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH7O60245 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH7O60245 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH7O60245 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH7O60245 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH7O60245 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH7O60245 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH7O60245 AC026471.6-201ENST00000622954 1905 ntBASIC20.47■□□□□ 0.87
PCDH7O60245 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH7O60245 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDH7O60245 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH7O60245 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH7O60245 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH7O60245 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDH7O60245 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH7O60245 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH7O60245 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH7O60245 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH7O60245 AC244015.2-201ENST00000616358 1861 ntBASIC20.47■□□□□ 0.87
PCDH7O60245 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH7O60245 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PCDH7O60245 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH7O60245 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH7O60245 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
PCDH7O60245 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDH7O60245 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PCDH7O60245 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH7O60245 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH7O60245 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH7O60245 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH7O60245 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH7O60245 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PCDH7O60245 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH7O60245 AC096631.2-201ENST00000436136 790 ntBASIC20.46■□□□□ 0.87
PCDH7O60245 AL034346.1-201ENST00000568244 1277 ntBASIC20.46■□□□□ 0.87
PCDH7O60245 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PCDH7O60245 AC233992.3-201ENST00000607491 485 ntBASIC20.46■□□□□ 0.87
PCDH7O60245 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH7O60245 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PCDH7O60245 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH7O60245 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH7O60245 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH7O60245 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH7O60245 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH7O60245 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
PCDH7O60245 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PCDH7O60245 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH7O60245 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDH7O60245 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH7O60245 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH7O60245 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH7O60245 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDH7O60245 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.45■□□□□ 0.86
PCDH7O60245 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH7O60245 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDH7O60245 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDH7O60245 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH7O60245 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDH7O60245 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH7O60245 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDH7O60245 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH7O60245 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH7O60245 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PCDH7O60245 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDH7O60245 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH7O60245 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH7O60245 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms