Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXS1O43638 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXS1O43638 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.31■□□□□ 0.84
FOXS1O43638 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXS1O43638 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXS1O43638 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXS1O43638 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXS1O43638 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXS1O43638 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FOXS1O43638 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
FOXS1O43638 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FOXS1O43638 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXS1O43638 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.3■□□□□ 0.84
FOXS1O43638 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXS1O43638 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.3■□□□□ 0.84
FOXS1O43638 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXS1O43638 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.3■□□□□ 0.84
FOXS1O43638 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXS1O43638 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXS1O43638 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
FOXS1O43638 AP004607.4-201ENST00000530158 1459 ntBASIC20.3■□□□□ 0.84
FOXS1O43638 AC092053.2-201ENST00000640557 1818 ntBASIC20.3■□□□□ 0.84
FOXS1O43638 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXS1O43638 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXS1O43638 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXS1O43638 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXS1O43638 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXS1O43638 AP006587.3-201ENST00000525742 1516 ntBASIC20.29■□□□□ 0.84
FOXS1O43638 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXS1O43638 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXS1O43638 GUSBP5-202ENST00000510805 1989 ntBASIC20.29■□□□□ 0.84
FOXS1O43638 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXS1O43638 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
FOXS1O43638 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXS1O43638 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXS1O43638 AC079140.4-201ENST00000507448 529 ntBASIC20.29■□□□□ 0.84
FOXS1O43638 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
FOXS1O43638 AC104564.3-201ENST00000582367 638 ntBASIC20.29■□□□□ 0.84
FOXS1O43638 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXS1O43638 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXS1O43638 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXS1O43638 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXS1O43638 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXS1O43638 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
FOXS1O43638 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXS1O43638 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXS1O43638 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXS1O43638 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXS1O43638 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
FOXS1O43638 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXS1O43638 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
FOXS1O43638 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXS1O43638 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXS1O43638 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXS1O43638 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXS1O43638 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXS1O43638 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXS1O43638 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXS1O43638 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXS1O43638 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXS1O43638 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXS1O43638 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXS1O43638 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXS1O43638 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXS1O43638 AC004854.2-201ENST00000608450 1441 ntBASIC20.27■□□□□ 0.84
FOXS1O43638 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXS1O43638 AC242852.2-201ENST00000615738 1807 ntBASIC20.27■□□□□ 0.84
FOXS1O43638 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXS1O43638 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXS1O43638 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXS1O43638 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXS1O43638 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FOXS1O43638 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXS1O43638 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.27■□□□□ 0.84
FOXS1O43638 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXS1O43638 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
FOXS1O43638 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXS1O43638 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXS1O43638 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXS1O43638 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXS1O43638 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXS1O43638 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXS1O43638 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.26■□□□□ 0.83
FOXS1O43638 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXS1O43638 AC092666.2-201ENST00000613287 246 ntBASIC20.26■□□□□ 0.83
FOXS1O43638 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXS1O43638 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXS1O43638 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXS1O43638 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXS1O43638 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXS1O43638 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXS1O43638 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
FOXS1O43638 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXS1O43638 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
FOXS1O43638 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXS1O43638 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.25■□□□□ 0.83
FOXS1O43638 AC022517.1-201ENST00000592429 346 ntBASIC20.25■□□□□ 0.83
FOXS1O43638 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.25■□□□□ 0.83
FOXS1O43638 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXS1O43638 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms