Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMAD6O43541 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMAD6O43541 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
SMAD6O43541 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMAD6O43541 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
SMAD6O43541 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMAD6O43541 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.78■■□□□ 1.08
SMAD6O43541 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMAD6O43541 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.78■■□□□ 1.08
SMAD6O43541 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.78■■□□□ 1.08
SMAD6O43541 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.78■■□□□ 1.08
SMAD6O43541 AC092437.1-201ENST00000624794 1048 ntBASIC21.78■■□□□ 1.08
SMAD6O43541 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMAD6O43541 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SMAD6O43541 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.78■■□□□ 1.08
SMAD6O43541 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.78■■□□□ 1.08
SMAD6O43541 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMAD6O43541 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SMAD6O43541 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SMAD6O43541 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMAD6O43541 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMAD6O43541 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMAD6O43541 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMAD6O43541 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMAD6O43541 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMAD6O43541 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMAD6O43541 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.77■■□□□ 1.08
SMAD6O43541 AL034346.1-201ENST00000568244 1277 ntBASIC21.77■■□□□ 1.08
SMAD6O43541 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMAD6O43541 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMAD6O43541 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMAD6O43541 AC233723.2-201ENST00000623798 2106 ntBASIC21.77■■□□□ 1.08
SMAD6O43541 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.77■■□□□ 1.08
SMAD6O43541 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.77■■□□□ 1.07
SMAD6O43541 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SMAD6O43541 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SMAD6O43541 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMAD6O43541 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.76■■□□□ 1.07
SMAD6O43541 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMAD6O43541 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMAD6O43541 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
SMAD6O43541 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.76■■□□□ 1.07
SMAD6O43541 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.76■■□□□ 1.07
SMAD6O43541 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.76■■□□□ 1.07
SMAD6O43541 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.76■■□□□ 1.07
SMAD6O43541 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMAD6O43541 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.76■■□□□ 1.07
SMAD6O43541 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.76■■□□□ 1.07
SMAD6O43541 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMAD6O43541 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMAD6O43541 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMAD6O43541 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMAD6O43541 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SMAD6O43541 AP006587.3-201ENST00000525742 1516 ntBASIC21.75■■□□□ 1.07
SMAD6O43541 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.75■■□□□ 1.07
SMAD6O43541 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SMAD6O43541 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.75■■□□□ 1.07
SMAD6O43541 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SMAD6O43541 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.75■■□□□ 1.07
SMAD6O43541 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMAD6O43541 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.75■■□□□ 1.07
SMAD6O43541 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.75■■□□□ 1.07
SMAD6O43541 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMAD6O43541 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMAD6O43541 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SMAD6O43541 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMAD6O43541 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMAD6O43541 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMAD6O43541 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.74■■□□□ 1.07
SMAD6O43541 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMAD6O43541 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.74■■□□□ 1.07
SMAD6O43541 AC133561.1-201ENST00000568600 2415 ntBASIC21.74■■□□□ 1.07
SMAD6O43541 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.74■■□□□ 1.07
SMAD6O43541 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.74■■□□□ 1.07
SMAD6O43541 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.74■■□□□ 1.07
SMAD6O43541 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.74■■□□□ 1.07
SMAD6O43541 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMAD6O43541 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMAD6O43541 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.73■■□□□ 1.07
SMAD6O43541 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMAD6O43541 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMAD6O43541 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.73■■□□□ 1.07
SMAD6O43541 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.73■■□□□ 1.07
SMAD6O43541 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SMAD6O43541 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.73■■□□□ 1.07
SMAD6O43541 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
SMAD6O43541 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMAD6O43541 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMAD6O43541 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.73■■□□□ 1.07
SMAD6O43541 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMAD6O43541 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMAD6O43541 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.73■■□□□ 1.07
SMAD6O43541 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMAD6O43541 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMAD6O43541 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SMAD6O43541 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
SMAD6O43541 KRT87P-202ENST00000534226 1464 ntBASIC21.72■■□□□ 1.07
SMAD6O43541 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMAD6O43541 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SMAD6O43541 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms