Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
FOXN1O15353 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
FOXN1O15353 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
FOXN1O15353 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.73■■□□□ 1.71
FOXN1O15353 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
FOXN1O15353 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
FOXN1O15353 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
FOXN1O15353 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
FOXN1O15353 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
FOXN1O15353 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
FOXN1O15353 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
FOXN1O15353 AC008550.1-201ENST00000511500 884 ntBASIC25.72■■□□□ 1.71
FOXN1O15353 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
FOXN1O15353 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25.72■■□□□ 1.71
FOXN1O15353 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.72■■□□□ 1.71
FOXN1O15353 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
FOXN1O15353 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
FOXN1O15353 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.72■■□□□ 1.71
FOXN1O15353 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
FOXN1O15353 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
FOXN1O15353 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.71■■□□□ 1.71
FOXN1O15353 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
FOXN1O15353 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
FOXN1O15353 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
FOXN1O15353 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.71■■□□□ 1.71
FOXN1O15353 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
FOXN1O15353 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
FOXN1O15353 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
FOXN1O15353 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.71■■□□□ 1.71
FOXN1O15353 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.71■■□□□ 1.71
FOXN1O15353 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.71■■□□□ 1.71
FOXN1O15353 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
FOXN1O15353 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
FOXN1O15353 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
FOXN1O15353 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
FOXN1O15353 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.7■■□□□ 1.7
FOXN1O15353 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
FOXN1O15353 KRT18P21-201ENST00000515767 1272 ntBASIC25.7■■□□□ 1.7
FOXN1O15353 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
FOXN1O15353 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
FOXN1O15353 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
FOXN1O15353 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
FOXN1O15353 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
FOXN1O15353 AC006058.3-201ENST00000606217 1069 ntBASIC25.7■■□□□ 1.7
FOXN1O15353 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
FOXN1O15353 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
FOXN1O15353 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
FOXN1O15353 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.7■■□□□ 1.7
FOXN1O15353 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
FOXN1O15353 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.69■■□□□ 1.7
FOXN1O15353 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
FOXN1O15353 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.69■■□□□ 1.7
FOXN1O15353 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.69■■□□□ 1.7
FOXN1O15353 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.69■■□□□ 1.7
FOXN1O15353 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
FOXN1O15353 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.69■■□□□ 1.7
FOXN1O15353 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
FOXN1O15353 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.69■■□□□ 1.7
FOXN1O15353 AC128676.1-201ENST00000454392 318 ntBASIC25.69■■□□□ 1.7
FOXN1O15353 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
FOXN1O15353 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.69■■□□□ 1.7
FOXN1O15353 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
FOXN1O15353 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
FOXN1O15353 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
FOXN1O15353 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.69■■□□□ 1.7
FOXN1O15353 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
FOXN1O15353 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
FOXN1O15353 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.68■■□□□ 1.7
FOXN1O15353 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
FOXN1O15353 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
FOXN1O15353 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.68■■□□□ 1.7
FOXN1O15353 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.68■■□□□ 1.7
FOXN1O15353 AC079140.4-201ENST00000507448 529 ntBASIC25.68■■□□□ 1.7
FOXN1O15353 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC25.68■■□□□ 1.7
FOXN1O15353 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.68■■□□□ 1.7
FOXN1O15353 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
FOXN1O15353 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.68■■□□□ 1.7
FOXN1O15353 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
FOXN1O15353 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
FOXN1O15353 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
FOXN1O15353 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
FOXN1O15353 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
FOXN1O15353 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
FOXN1O15353 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
FOXN1O15353 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.67■■□□□ 1.7
FOXN1O15353 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.67■■□□□ 1.7
FOXN1O15353 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC25.67■■□□□ 1.7
FOXN1O15353 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
FOXN1O15353 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
FOXN1O15353 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
FOXN1O15353 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.66■■□□□ 1.7
FOXN1O15353 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
FOXN1O15353 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC25.66■■□□□ 1.7
FOXN1O15353 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
FOXN1O15353 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.66■■□□□ 1.7
FOXN1O15353 UBE2DNL-204ENST00000602536 740 ntBASIC25.66■■□□□ 1.7
FOXN1O15353 MMD2-204ENST00000612910 778 ntTSL 5 BASIC25.66■■□□□ 1.7
FOXN1O15353 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
FOXN1O15353 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
FOXN1O15353 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms