Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 Z98882.1-201ENST00000622160 2253 ntBASIC17.22■□□□□ 0.35
UPK2O00526 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK2O00526 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
UPK2O00526 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK2O00526 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPK2O00526 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPK2O00526 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPK2O00526 SERBP1P1-201ENST00000396021 1160 ntBASIC17.22■□□□□ 0.35
UPK2O00526 DUX4L19-201ENST00000557448 1267 ntBASIC17.22■□□□□ 0.35
UPK2O00526 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK2O00526 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
UPK2O00526 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK2O00526 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK2O00526 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
UPK2O00526 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.21■□□□□ 0.35
UPK2O00526 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
UPK2O00526 AC026471.6-201ENST00000622954 1905 ntBASIC17.21■□□□□ 0.35
UPK2O00526 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.21■□□□□ 0.35
UPK2O00526 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK2O00526 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
UPK2O00526 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPK2O00526 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.21■□□□□ 0.35
UPK2O00526 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.21■□□□□ 0.35
UPK2O00526 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPK2O00526 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.21■□□□□ 0.35
UPK2O00526 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.21■□□□□ 0.35
UPK2O00526 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK2O00526 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
UPK2O00526 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.2■□□□□ 0.34
UPK2O00526 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UPK2O00526 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.2■□□□□ 0.34
UPK2O00526 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
UPK2O00526 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
UPK2O00526 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.2■□□□□ 0.34
UPK2O00526 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.2■□□□□ 0.34
UPK2O00526 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.2■□□□□ 0.34
UPK2O00526 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.2■□□□□ 0.34
UPK2O00526 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
UPK2O00526 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.2■□□□□ 0.34
UPK2O00526 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK2O00526 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK2O00526 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
UPK2O00526 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK2O00526 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK2O00526 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
UPK2O00526 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK2O00526 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.19■□□□□ 0.34
UPK2O00526 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK2O00526 MIR4466-201ENST00000606121 54 ntBASIC17.19■□□□□ 0.34
UPK2O00526 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK2O00526 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK2O00526 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK2O00526 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.18■□□□□ 0.34
UPK2O00526 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.18■□□□□ 0.34
UPK2O00526 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.18■□□□□ 0.34
UPK2O00526 AC136469.2-201ENST00000623944 1028 ntBASIC17.18■□□□□ 0.34
UPK2O00526 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.18■□□□□ 0.34
UPK2O00526 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK2O00526 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK2O00526 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
UPK2O00526 AP005435.1-201ENST00000529293 1178 ntBASIC17.17■□□□□ 0.34
UPK2O00526 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.17■□□□□ 0.34
UPK2O00526 AL034346.1-201ENST00000568244 1277 ntBASIC17.17■□□□□ 0.34
UPK2O00526 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
UPK2O00526 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK2O00526 AC005229.4-201ENST00000610085 2198 ntBASIC17.17■□□□□ 0.34
UPK2O00526 AC011298.3-201ENST00000615796 283 ntBASIC17.17■□□□□ 0.34
UPK2O00526 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPK2O00526 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms