Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 AC110285.6-201ENST00000617652 491 ntBASIC19.08■□□□□ 0.64
NPIPB4C9JG80 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPB4C9JG80 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.07■□□□□ 0.64
NPIPB4C9JG80 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPB4C9JG80 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.07■□□□□ 0.64
NPIPB4C9JG80 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPB4C9JG80 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPB4C9JG80 AC099791.1-201ENST00000416440 715 ntBASIC19.07■□□□□ 0.64
NPIPB4C9JG80 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPB4C9JG80 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPB4C9JG80 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.07■□□□□ 0.64
NPIPB4C9JG80 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPB4C9JG80 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPB4C9JG80 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPB4C9JG80 RASA4CP-201ENST00000424092 1398 ntBASIC19.06■□□□□ 0.64
NPIPB4C9JG80 AP006587.3-201ENST00000525742 1516 ntBASIC19.06■□□□□ 0.64
NPIPB4C9JG80 AC026471.6-201ENST00000622954 1905 ntBASIC19.06■□□□□ 0.64
NPIPB4C9JG80 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 MIR939-201ENST00000401314 82 ntBASIC19.06■□□□□ 0.64
NPIPB4C9JG80 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 AC091305.1-201ENST00000479476 895 ntBASIC19.06■□□□□ 0.64
NPIPB4C9JG80 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 AC008764.7-201ENST00000593779 1081 ntBASIC19.06■□□□□ 0.64
NPIPB4C9JG80 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.06■□□□□ 0.64
NPIPB4C9JG80 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPB4C9JG80 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NPIPB4C9JG80 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB4C9JG80 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.04■□□□□ 0.64
NPIPB4C9JG80 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NPIPB4C9JG80 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB4C9JG80 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB4C9JG80 AL031432.3-201ENST00000607698 485 ntBASIC19.04■□□□□ 0.64
NPIPB4C9JG80 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB4C9JG80 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB4C9JG80 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPB4C9JG80 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 AC009237.3-201ENST00000393279 1427 ntBASIC19.03■□□□□ 0.64
NPIPB4C9JG80 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.03■□□□□ 0.64
NPIPB4C9JG80 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
NPIPB4C9JG80 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms