Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RARRES2P1-201ENST00000474487 481 ntBASIC21.5■■□□□ 1.03
TRIM49D1C9J1S8 AC241377.3-202ENST00000626088 1088 ntBASIC21.5■■□□□ 1.03
TRIM49D1C9J1S8 AC241585.3-202ENST00000628937 1088 ntBASIC21.5■■□□□ 1.03
TRIM49D1C9J1S8 AC245100.8-202ENST00000629247 1058 ntBASIC21.5■■□□□ 1.03
TRIM49D1C9J1S8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
TRIM49D1C9J1S8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM49D1C9J1S8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49D1C9J1S8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49D1C9J1S8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM49D1C9J1S8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49D1C9J1S8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 OR7E47P-201ENST00000546390 1422 ntBASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 AC006455.2-201ENST00000429931 906 ntBASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 MIR6724-1-201ENST00000616420 92 ntBASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 MIR6724-2-201ENST00000616483 92 ntBASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 MIR6724-4-201ENST00000617390 92 ntBASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 MIR6724-3-201ENST00000622482 92 ntBASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM49D1C9J1S8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 AC009299.2-201ENST00000482477 511 ntBASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 pRNA.6-201ENST00000610482 90 ntBASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 pRNA.5-201ENST00000612139 90 ntBASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 pRNA.11-201ENST00000618423 90 ntBASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 pRNA.13-201ENST00000619112 90 ntBASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49D1C9J1S8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 UNC93B8-201ENST00000511903 705 ntBASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM49D1C9J1S8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM49D1C9J1S8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.45■■□□□ 1.03
TRIM49D1C9J1S8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 AC104564.3-201ENST00000582367 638 ntBASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TRIM49D1C9J1S8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 AC073130.3-201ENST00000624389 2278 ntBASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49D1C9J1S8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms