Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRRM4A7MD48 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SRRM4A7MD48 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.29■□□□□ 0.36
SRRM4A7MD48 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM4A7MD48 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRRM4A7MD48 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SRRM4A7MD48 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM4A7MD48 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRRM4A7MD48 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM4A7MD48 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SRRM4A7MD48 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.28■□□□□ 0.36
SRRM4A7MD48 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.28■□□□□ 0.36
SRRM4A7MD48 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SRRM4A7MD48 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.28■□□□□ 0.36
SRRM4A7MD48 MIR4767-201ENST00000582827 78 ntBASIC17.28■□□□□ 0.36
SRRM4A7MD48 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SRRM4A7MD48 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.28■□□□□ 0.36
SRRM4A7MD48 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.28■□□□□ 0.36
SRRM4A7MD48 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.28■□□□□ 0.36
SRRM4A7MD48 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM4A7MD48 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM4A7MD48 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM4A7MD48 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM4A7MD48 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
SRRM4A7MD48 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM4A7MD48 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SRRM4A7MD48 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM4A7MD48 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.27■□□□□ 0.36
SRRM4A7MD48 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.27■□□□□ 0.36
SRRM4A7MD48 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.27■□□□□ 0.36
SRRM4A7MD48 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.27■□□□□ 0.36
SRRM4A7MD48 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRRM4A7MD48 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SRRM4A7MD48 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRRM4A7MD48 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRRM4A7MD48 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.27■□□□□ 0.35
SRRM4A7MD48 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM4A7MD48 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM4A7MD48 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.26■□□□□ 0.35
SRRM4A7MD48 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM4A7MD48 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM4A7MD48 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM4A7MD48 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SRRM4A7MD48 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.26■□□□□ 0.35
SRRM4A7MD48 AC024257.2-201ENST00000549699 147 ntBASIC17.26■□□□□ 0.35
SRRM4A7MD48 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM4A7MD48 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM4A7MD48 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM4A7MD48 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM4A7MD48 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.26■□□□□ 0.35
SRRM4A7MD48 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM4A7MD48 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM4A7MD48 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM4A7MD48 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM4A7MD48 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM4A7MD48 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM4A7MD48 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.25■□□□□ 0.35
SRRM4A7MD48 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM4A7MD48 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM4A7MD48 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.25■□□□□ 0.35
SRRM4A7MD48 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SRRM4A7MD48 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.25■□□□□ 0.35
SRRM4A7MD48 AL136162.1-201ENST00000607711 1078 ntBASIC17.25■□□□□ 0.35
SRRM4A7MD48 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM4A7MD48 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM4A7MD48 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM4A7MD48 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM4A7MD48 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
SRRM4A7MD48 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.24■□□□□ 0.35
SRRM4A7MD48 BX842568.3-201ENST00000418104 571 ntBASIC17.24■□□□□ 0.35
SRRM4A7MD48 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SRRM4A7MD48 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.24■□□□□ 0.35
SRRM4A7MD48 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SRRM4A7MD48 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SRRM4A7MD48 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 AC008406.3-201ENST00000620001 1374 ntBASIC17.24■□□□□ 0.35
SRRM4A7MD48 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM4A7MD48 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM4A7MD48 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SRRM4A7MD48 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.23■□□□□ 0.35
SRRM4A7MD48 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms