Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM43BA6NCK2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43BA6NCK2 BX276092.2-201ENST00000417668 665 ntBASIC23.67■■□□□ 1.38
TRIM43BA6NCK2 AC007322.4-201ENST00000509611 723 ntBASIC23.67■■□□□ 1.38
TRIM43BA6NCK2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43BA6NCK2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
TRIM43BA6NCK2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM43BA6NCK2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43BA6NCK2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43BA6NCK2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TRIM43BA6NCK2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM43BA6NCK2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.66■■□□□ 1.38
TRIM43BA6NCK2 AL512625.2-201ENST00000417533 625 ntBASIC23.66■■□□□ 1.38
TRIM43BA6NCK2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM43BA6NCK2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.66■■□□□ 1.38
TRIM43BA6NCK2 AC006058.3-201ENST00000606217 1069 ntBASIC23.66■■□□□ 1.38
TRIM43BA6NCK2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM43BA6NCK2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43BA6NCK2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM43BA6NCK2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43BA6NCK2 AC128676.1-201ENST00000454392 318 ntBASIC23.65■■□□□ 1.38
TRIM43BA6NCK2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43BA6NCK2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43BA6NCK2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM43BA6NCK2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM43BA6NCK2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
TRIM43BA6NCK2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43BA6NCK2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
TRIM43BA6NCK2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM43BA6NCK2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.64■■□□□ 1.38
TRIM43BA6NCK2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIM43BA6NCK2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM43BA6NCK2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM43BA6NCK2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
TRIM43BA6NCK2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.64■■□□□ 1.37
TRIM43BA6NCK2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIM43BA6NCK2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM43BA6NCK2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM43BA6NCK2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM43BA6NCK2 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM43BA6NCK2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 AC097658.1-201ENST00000475555 843 ntBASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43BA6NCK2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43BA6NCK2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43BA6NCK2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43BA6NCK2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43BA6NCK2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43BA6NCK2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM43BA6NCK2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.62■■□□□ 1.37
TRIM43BA6NCK2 AC008694.1-202ENST00000636953 945 ntBASIC23.62■■□□□ 1.37
TRIM43BA6NCK2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43BA6NCK2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43BA6NCK2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM43BA6NCK2 AC142381.3-201ENST00000568208 1670 ntBASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 AC069236.1-201ENST00000604339 616 ntBASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43BA6NCK2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM43BA6NCK2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM43BA6NCK2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM43BA6NCK2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
TRIM43BA6NCK2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM43BA6NCK2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.59■■□□□ 1.37
TRIM43BA6NCK2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM43BA6NCK2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms