Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 AC068587.7-201ENST00000641602 218 ntBASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV9S1A1TA0A576 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.61■■□□□ 1.05
TCRBV9S1A1TA0A576 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 MIR3621-201ENST00000580529 85 ntBASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 AC104564.3-201ENST00000582367 638 ntBASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 AL356740.2-201ENST00000601559 647 ntBASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV9S1A1TA0A576 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV9S1A1TA0A576 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV9S1A1TA0A576 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TCRBV9S1A1TA0A576 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.58■■□□□ 1.04
TCRBV9S1A1TA0A576 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TCRBV9S1A1TA0A576 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.58■■□□□ 1.04
TCRBV9S1A1TA0A576 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TCRBV9S1A1TA0A576 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 AL035685.1-201ENST00000636663 812 ntBASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.57■■□□□ 1.04
TCRBV9S1A1TA0A576 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms