Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 AC087239.1-201ENST00000622671 572 ntBASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00959A0A1B0GUT2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 AC005229.4-201ENST00000610085 2198 ntBASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 AC092171.4-201ENST00000609130 632 ntBASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00959A0A1B0GUT2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 MIR3181-201ENST00000578512 73 ntBASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 AC104564.3-201ENST00000582367 638 ntBASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00959A0A1B0GUT2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 SRD5A1P1-201ENST00000442297 786 ntBASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 OR2I1P-207ENST00000453522 948 ntBASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 MIR3621-201ENST00000580529 85 ntBASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00959A0A1B0GUT2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.58□□□□□ -0.07
LINC00959A0A1B0GUT2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00959A0A1B0GUT2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.58□□□□□ -0.07
LINC00959A0A1B0GUT2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00959A0A1B0GUT2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 AL035685.1-201ENST00000636663 812 ntBASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00959A0A1B0GUT2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms