Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 AC010542.4-201ENST00000563151 1910 ntBASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 GUSBP5-201ENST00000418136 578 ntBASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF103-CHMP3A0A140T963 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF103-CHMP3A0A140T963 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF103-CHMP3A0A140T963 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF103-CHMP3A0A140T963 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF103-CHMP3A0A140T963 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF103-CHMP3A0A140T963 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF103-CHMP3A0A140T963 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF103-CHMP3A0A140T963 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RNF103-CHMP3A0A140T963 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF103-CHMP3A0A140T963 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 AL499627.2-201ENST00000606283 725 ntBASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF103-CHMP3A0A140T963 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 AC241377.3-202ENST00000626088 1088 ntBASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 AC241585.3-202ENST00000628937 1088 ntBASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 AC245100.8-202ENST00000629247 1058 ntBASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF103-CHMP3A0A140T963 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF103-CHMP3A0A140T963 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF103-CHMP3A0A140T963 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
RNF103-CHMP3A0A140T963 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF103-CHMP3A0A140T963 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF103-CHMP3A0A140T963 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF103-CHMP3A0A140T963 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF103-CHMP3A0A140T963 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF103-CHMP3A0A140T963 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF103-CHMP3A0A140T963 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 AL356740.2-201ENST00000601559 647 ntBASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
RNF103-CHMP3A0A140T963 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms