Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 AL031602.1-201ENST00000633169 911 ntBASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV27A0A0K0K1C4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 AC026471.6-201ENST00000622954 1905 ntBASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV27A0A0K0K1C4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 OR7E47P-201ENST00000546390 1422 ntBASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV27A0A0K0K1C4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 BX664725.1-201ENST00000438252 379 ntBASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 AL031848.2-201ENST00000607670 837 ntBASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV27A0A0K0K1C4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms