Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 AP006587.3-201ENST00000525742 1516 ntBASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 TPRG1LP1-201ENST00000598702 760 ntBASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.25■□□□□ 0.99
TRBV5-4A0A0C4DH59 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 AC027612.3-201ENST00000413684 1047 ntBASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 LINC00565-201ENST00000562710 2331 ntBASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-4A0A0C4DH59 AC055733.4-201ENST00000638462 1354 ntBASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 MIR6084-201ENST00000622012 110 ntBASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 AC005224.4-201ENST00000583262 1652 ntBASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-4A0A0C4DH59 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-4A0A0C4DH59 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TRBV5-4A0A0C4DH59 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TRBV5-4A0A0C4DH59 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.22■□□□□ 0.99
TRBV5-4A0A0C4DH59 AC010542.4-201ENST00000563151 1910 ntBASIC21.22■□□□□ 0.99
TRBV5-4A0A0C4DH59 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-4A0A0C4DH59 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.22■□□□□ 0.99
TRBV5-4A0A0C4DH59 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.22■□□□□ 0.99
TRBV5-4A0A0C4DH59 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-4A0A0C4DH59 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-4A0A0C4DH59 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-4A0A0C4DH59 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.99
TRBV5-4A0A0C4DH59 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.2■□□□□ 0.98
TRBV5-4A0A0C4DH59 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.19■□□□□ 0.98
TRBV5-4A0A0C4DH59 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV5-4A0A0C4DH59 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRBV5-4A0A0C4DH59 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms