Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 AL031602.1-201ENST00000633169 911 ntBASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 AC133637.1-201ENST00000624115 1537 ntBASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV21A0A0B4J279 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 RARRES2P1-201ENST00000474487 481 ntBASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 AC009299.2-201ENST00000482477 511 ntBASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 AC104564.3-201ENST00000582367 638 ntBASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 AC068587.7-201ENST00000641602 218 ntBASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 OR7E47P-201ENST00000546390 1422 ntBASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV21A0A0B4J279 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 Z98882.1-201ENST00000622160 2253 ntBASIC15.91■□□□□ 0.14
TRAV21A0A0B4J279 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 AL451085.2-201ENST00000605085 799 ntBASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 pRNA.6-201ENST00000610482 90 ntBASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 pRNA.5-201ENST00000612139 90 ntBASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 pRNA.11-201ENST00000618423 90 ntBASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 pRNA.13-201ENST00000619112 90 ntBASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 AC087239.1-201ENST00000622671 572 ntBASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV21A0A0B4J279 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
TRAV21A0A0B4J279 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAV21A0A0B4J279 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms