Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 AC131212.1-201ENST00000613771 668 ntBASIC18■□□□□ 0.47
TRAV24A0A0B4J272 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV24A0A0B4J272 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV24A0A0B4J272 UNC93B3-201ENST00000308076 687 ntBASIC17.99■□□□□ 0.47
TRAV24A0A0B4J272 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV24A0A0B4J272 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV24A0A0B4J272 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV24A0A0B4J272 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
TRAV24A0A0B4J272 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV24A0A0B4J272 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 Z98882.1-201ENST00000622160 2253 ntBASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 MIR4767-201ENST00000582827 78 ntBASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV24A0A0B4J272 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV24A0A0B4J272 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 BX842568.3-201ENST00000418104 571 ntBASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV24A0A0B4J272 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV24A0A0B4J272 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.96■□□□□ 0.46
TRAV24A0A0B4J272 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms