Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV39A0A0B4J263 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 SLC47A1P1-202ENST00000449666 945 ntBASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 AC026310.3-201ENST00000625186 2373 ntBASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 OR7E47P-201ENST00000546390 1422 ntBASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV39A0A0B4J263 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 AL024507.2-201ENST00000606070 2574 ntBASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV39A0A0B4J263 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.96■□□□□ 0.46
TRAV39A0A0B4J263 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 DUX4L19-201ENST00000557448 1267 ntBASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 AC136469.2-201ENST00000623944 1028 ntBASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV39A0A0B4J263 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 AC010141.3-201ENST00000456659 717 ntBASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV39A0A0B4J263 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV39A0A0B4J263 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV39A0A0B4J263 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV39A0A0B4J263 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV39A0A0B4J263 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV39A0A0B4J263 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV39A0A0B4J263 UNC93B3-201ENST00000308076 687 ntBASIC17.93■□□□□ 0.46
TRAV39A0A0B4J263 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV39A0A0B4J263 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV39A0A0B4J263 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.93■□□□□ 0.46
TRAV39A0A0B4J263 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms