Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV18A0A075B6X5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 AC092667.1-201ENST00000434301 2586 ntBASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV18A0A075B6X5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 MIR6722-201ENST00000617286 78 ntBASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV18A0A075B6X5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV18A0A075B6X5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 AC004987.1-201ENST00000428627 508 ntBASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 ATP5G2P3-201ENST00000429083 425 ntBASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 AL121603.2-201ENST00000557373 2117 ntBASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 HSD17B1P1-201ENST00000590052 955 ntBASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 NTF6A-201ENST00000591175 560 ntBASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TRAV18A0A075B6X5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV18A0A075B6X5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV18A0A075B6X5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV18A0A075B6X5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TRAV18A0A075B6X5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRAV18A0A075B6X5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV18A0A075B6X5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV18A0A075B6X5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAV18A0A075B6X5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAV18A0A075B6X5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV18A0A075B6X5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms