Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 CYP4A22-207ENST00000620131 1760 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 MIER1-207ENST00000371018 3875 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 AC007365.3-202ENST00000417695 1722 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 ANAPC10-217ENST00000613466 1674 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 AC063952.1-201ENST00000637360 2666 ntTSL 3 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 FAM71A-201ENST00000294829 2305 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 LINC02288-201ENST00000500215 2924 ntTSL 2 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 ABCB7-210ENST00000620875 2408 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 SOHLH2-201ENST00000317764 1909 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 KCNJ15-206ENST00000398932 2747 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 GSTM4-202ENST00000336075 657 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 CFAP58-201ENST00000369703 466 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 LYG2-203ENST00000409679 878 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 OR13E1P-201ENST00000417104 922 ntBASIC12.67□□□□□ -0.38
LMO3Q8TAP4 SGO1-204ENST00000417364 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 SGO1-207ENST00000425061 1213 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 RAB15-202ENST00000426039 683 ntTSL 3 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 SGO1-210ENST00000443724 931 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 ARSDP1-201ENST00000443820 1215 ntBASIC12.67□□□□□ -0.38
LMO3Q8TAP4 POLR2LP1-206ENST00000444785 187 ntBASIC12.67□□□□□ -0.38
LMO3Q8TAP4 SGO1-211ENST00000452020 1162 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 RN7SL313P-201ENST00000497618 288 ntBASIC12.67□□□□□ -0.38
LMO3Q8TAP4 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 C10orf113-202ENST00000534331 579 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 AC007540.1-201ENST00000548473 507 ntTSL 3 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 PIGBOS1-203ENST00000567948 801 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 AC025165.4-201ENST00000602327 433 ntBASIC12.67□□□□□ -0.38
LMO3Q8TAP4 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 AC019197.1-210ENST00000625505 758 ntTSL 5 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 GSTM4-213ENST00000638994 657 ntTSL 5 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 PDE6C-201ENST00000371447 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 TGM5-206ENST00000611276 2510 ntTSL 5 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 SLC4A5-202ENST00000358683 3142 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 AKAP1-206ENST00000571629 3105 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 TUBGCP5-205ENST00000615383 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 MED6-202ENST00000430055 1507 ntTSL 2 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 TMEM69-201ENST00000372025 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 USHBP1-201ENST00000252597 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 ATP1A3-208ENST00000545399 3618 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO3Q8TAP4 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 PHKB-202ENST00000323584 4283 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 HOXA-AS2-201ENST00000517550 2022 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 PLSCR4-202ENST00000383083 3033 ntTSL 5 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 SKA3-203ENST00000400018 2745 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 SLC4A9-204ENST00000506757 3277 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 RPL15P3-201ENST00000391491 615 ntBASIC12.66□□□□□ -0.38
LMO3Q8TAP4 AP001610.1-201ENST00000411427 1116 ntTSL 5 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 HLCS-IT1-201ENST00000434195 531 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 AL391822.1-201ENST00000452580 562 ntBASIC12.66□□□□□ -0.38
LMO3Q8TAP4 RBMXP4-201ENST00000507797 1134 ntBASIC12.66□□□□□ -0.38
LMO3Q8TAP4 AP003692.1-202ENST00000510185 502 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 FAXDC2-205ENST00000517938 1203 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 IGKV2-10-201ENST00000518834 351 ntBASIC12.66□□□□□ -0.38
LMO3Q8TAP4 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 AL390726.4-201ENST00000566538 469 ntTSL 5 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 AF254982.1-201ENST00000611755 311 ntBASIC12.66□□□□□ -0.38
LMO3Q8TAP4 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO3Q8TAP4 SLC25A25-201ENST00000373064 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms