Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 EEF1DP3-203ENST00000566025 782 ntBASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 AC013268.1-206ENST00000638368 961 ntBASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 AC112229.1-201ENST00000639295 961 ntBASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 AC133552.2-202ENST00000575694 574 ntBASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 LINC00526-201ENST00000581067 1875 ntBASIC23.88■■□□□ 1.41
SCN10AQ9Y5Y9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.87■■□□□ 1.41
SCN10AQ9Y5Y9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCN10AQ9Y5Y9 AP006587.3-201ENST00000525742 1516 ntBASIC23.86■■□□□ 1.41
SCN10AQ9Y5Y9 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.86■■□□□ 1.41
SCN10AQ9Y5Y9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.86■■□□□ 1.41
SCN10AQ9Y5Y9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SCN10AQ9Y5Y9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 CYP2T1P-201ENST00000432607 1285 ntBASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 TSPY20P-201ENST00000450910 630 ntBASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.85■■□□□ 1.41
SCN10AQ9Y5Y9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCN10AQ9Y5Y9 TMEM191A-211ENST00000637163 1067 ntBASIC23.84■■□□□ 1.41
SCN10AQ9Y5Y9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCN10AQ9Y5Y9 OR7E47P-201ENST00000546390 1422 ntBASIC23.84■■□□□ 1.41
SCN10AQ9Y5Y9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
SCN10AQ9Y5Y9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 AC007322.4-201ENST00000509611 723 ntBASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.83■■□□□ 1.41
SCN10AQ9Y5Y9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCN10AQ9Y5Y9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.83■■□□□ 1.4
SCN10AQ9Y5Y9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 AC066615.1-201ENST00000640911 628 ntBASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 AC068338.2-201ENST00000563278 1430 ntBASIC23.82■■□□□ 1.4
SCN10AQ9Y5Y9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms