Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 AC104187.1-201ENST00000607510 612 ntBASIC21.39■■□□□ 1.01
SNX11Q9Y5W9 AC005224.4-201ENST00000583262 1652 ntBASIC21.39■■□□□ 1.01
SNX11Q9Y5W9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SNX11Q9Y5W9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.39■■□□□ 1.01
SNX11Q9Y5W9 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.39■■□□□ 1.01
SNX11Q9Y5W9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNX11Q9Y5W9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SNX11Q9Y5W9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNX11Q9Y5W9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SNX11Q9Y5W9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNX11Q9Y5W9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNX11Q9Y5W9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.38■■□□□ 1.01
SNX11Q9Y5W9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SNX11Q9Y5W9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SNX11Q9Y5W9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNX11Q9Y5W9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 DUSP8P3-201ENST00000399571 1760 ntBASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNX11Q9Y5W9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 KRT87P-202ENST00000534226 1464 ntBASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNX11Q9Y5W9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 AC009237.3-201ENST00000393279 1427 ntBASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.35■■□□□ 1.01
SNX11Q9Y5W9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SNX11Q9Y5W9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.33■■□□□ 1.01
SNX11Q9Y5W9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SNX11Q9Y5W9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SNX11Q9Y5W9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.33■■□□□ 1.01
SNX11Q9Y5W9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.33■■□□□ 1.01
SNX11Q9Y5W9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.33■■□□□ 1.01
SNX11Q9Y5W9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SNX11Q9Y5W9 AL050303.2-201ENST00000619798 666 ntBASIC21.33■■□□□ 1.01
SNX11Q9Y5W9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.33■■□□□ 1.01
SNX11Q9Y5W9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SNX11Q9Y5W9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SNX11Q9Y5W9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.33■■□□□ 1
SNX11Q9Y5W9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNX11Q9Y5W9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
SNX11Q9Y5W9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.32■■□□□ 1
SNX11Q9Y5W9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.32■■□□□ 1
SNX11Q9Y5W9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.32■■□□□ 1
SNX11Q9Y5W9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.32■■□□□ 1
SNX11Q9Y5W9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SNX11Q9Y5W9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SNX11Q9Y5W9 UBE2DNL-204ENST00000602536 740 ntBASIC21.32■■□□□ 1
SNX11Q9Y5W9 AL121832.2-201ENST00000610979 668 ntBASIC21.32■■□□□ 1
SNX11Q9Y5W9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.32■■□□□ 1
SNX11Q9Y5W9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms