Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 LINC01006-201ENST00000333319 2292 ntBASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 LINC01960-201ENST00000563759 1884 ntBASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 YBX1P4-201ENST00000392794 808 ntBASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGB1Q9Y5G3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.64■□□□□ 0.74
PCDHGB1Q9Y5G3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGB1Q9Y5G3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGB1Q9Y5G3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGB1Q9Y5G3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGB1Q9Y5G3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGB1Q9Y5G3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB1Q9Y5G3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB1Q9Y5G3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 RNF165-205ENST00000588679 2904 ntBASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGB1Q9Y5G3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
PCDHGB1Q9Y5G3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms