Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB11Q9Y5F2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHB11Q9Y5F2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHB11Q9Y5F2 AC010141.3-201ENST00000456659 717 ntBASIC21.09■□□□□ 0.97
PCDHB11Q9Y5F2 KRT18P14-201ENST00000534205 1250 ntBASIC21.09■□□□□ 0.97
PCDHB11Q9Y5F2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB11Q9Y5F2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDHB11Q9Y5F2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB11Q9Y5F2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 ID1-201ENST00000376105 1233 ntBASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 AC087742.1-201ENST00000575880 1738 ntBASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHB11Q9Y5F2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB11Q9Y5F2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB11Q9Y5F2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.08■□□□□ 0.96
PCDHB11Q9Y5F2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDHB11Q9Y5F2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB11Q9Y5F2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB11Q9Y5F2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 LINC00565-201ENST00000562710 2331 ntBASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 AC105233.4-201ENST00000642045 216 ntBASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDHB11Q9Y5F2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 TERF1P2-201ENST00000583350 1212 ntBASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 AC127496.7-201ENST00000625110 1798 ntBASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 AC242852.2-201ENST00000615738 1807 ntBASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB11Q9Y5F2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms