Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 AC005229.4-201ENST00000610085 2198 ntBASIC17.19■□□□□ 0.34
LSM4Q9Y4Z0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM4Q9Y4Z0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 DUX4L19-201ENST00000557448 1267 ntBASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 AL136967.2-201ENST00000623968 743 ntBASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM4Q9Y4Z0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 MIR5787-201ENST00000611784 55 ntBASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM4Q9Y4Z0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 AC105265.2-201ENST00000467189 838 ntBASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 AC104564.3-201ENST00000582367 638 ntBASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 AC005703.6-201ENST00000623265 1329 ntBASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM4Q9Y4Z0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.34
LSM4Q9Y4Z0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LSM4Q9Y4Z0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms