Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 AC087239.1-201ENST00000622671 572 ntBASIC19.19■□□□□ 0.66
POLR1DQ9Y2S0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.19■□□□□ 0.66
POLR1DQ9Y2S0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1DQ9Y2S0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1DQ9Y2S0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
POLR1DQ9Y2S0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1DQ9Y2S0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 AC131212.1-201ENST00000613771 668 ntBASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1DQ9Y2S0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR1DQ9Y2S0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 AL136116.3-201ENST00000402907 1138 ntBASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 OR2I1P-207ENST00000453522 948 ntBASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1DQ9Y2S0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 SERBP1P1-201ENST00000396021 1160 ntBASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR1DQ9Y2S0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.14■□□□□ 0.66
POLR1DQ9Y2S0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
POLR1DQ9Y2S0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
POLR1DQ9Y2S0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
POLR1DQ9Y2S0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 AL138724.1-201ENST00000606771 1088 ntBASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 AL031602.1-201ENST00000633169 911 ntBASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 AC068587.7-201ENST00000641602 218 ntBASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
POLR1DQ9Y2S0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms