Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 AL034346.1-201ENST00000568244 1277 ntBASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 RAP2CP1-201ENST00000605103 478 ntBASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.6■■□□□ 1.05
NCKAP1Q9Y2A7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 AC006970.2-201ENST00000450065 779 ntBASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.59■■□□□ 1.05
NCKAP1Q9Y2A7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCKAP1Q9Y2A7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.58■■□□□ 1.05
NCKAP1Q9Y2A7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.58■■□□□ 1.05
NCKAP1Q9Y2A7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.58■■□□□ 1.05
NCKAP1Q9Y2A7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NCKAP1Q9Y2A7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NCKAP1Q9Y2A7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 AC055733.4-201ENST00000638462 1354 ntBASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKAP1Q9Y2A7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.56■■□□□ 1.04
NCKAP1Q9Y2A7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKAP1Q9Y2A7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCKAP1Q9Y2A7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCKAP1Q9Y2A7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCKAP1Q9Y2A7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCKAP1Q9Y2A7 AP001160.3-201ENST00000601484 763 ntBASIC21.54■■□□□ 1.04
NCKAP1Q9Y2A7 DUSP8P5-201ENST00000422884 1815 ntBASIC21.54■■□□□ 1.04
NCKAP1Q9Y2A7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCKAP1Q9Y2A7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.53■■□□□ 1.04
NCKAP1Q9Y2A7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NCKAP1Q9Y2A7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1Q9Y2A7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.53■■□□□ 1.04
NCKAP1Q9Y2A7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms