Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPA1Q9UND3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA1Q9UND3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA1Q9UND3 AC233723.2-201ENST00000623798 2106 ntBASIC19.84■□□□□ 0.77
NPIPA1Q9UND3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.84■□□□□ 0.77
NPIPA1Q9UND3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPA1Q9UND3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPA1Q9UND3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NPIPA1Q9UND3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA1Q9UND3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPIPA1Q9UND3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA1Q9UND3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPIPA1Q9UND3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPIPA1Q9UND3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.83■□□□□ 0.77
NPIPA1Q9UND3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPA1Q9UND3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPIPA1Q9UND3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPIPA1Q9UND3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.83■□□□□ 0.76
NPIPA1Q9UND3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NPIPA1Q9UND3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
NPIPA1Q9UND3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPIPA1Q9UND3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPIPA1Q9UND3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 AC010141.3-201ENST00000456659 717 ntBASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPIPA1Q9UND3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 TPRG1LP1-201ENST00000598702 760 ntBASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 BX005040.4-201ENST00000637145 1518 ntBASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA1Q9UND3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NPIPA1Q9UND3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms