Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 RAP2CP1-202ENST00000605179 643 ntBASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN2Q9UHD9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 AC012354.3-201ENST00000623734 483 ntBASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
UBQLN2Q9UHD9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
UBQLN2Q9UHD9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.08■□□□□ 0.49
UBQLN2Q9UHD9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN2Q9UHD9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 AC129492.7-201ENST00000622992 756 ntBASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN2Q9UHD9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 DUX4L18-201ENST00000553347 1267 ntBASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 AC138932.1-201ENST00000534164 6830 ntBASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN2Q9UHD9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms