Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
KLHL1Q9NR64 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 AC105233.4-201ENST00000642045 216 ntBASIC20.16■□□□□ 0.82
KLHL1Q9NR64 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 LINC00565-201ENST00000562710 2331 ntBASIC20.16■□□□□ 0.82
KLHL1Q9NR64 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL1Q9NR64 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KLHL1Q9NR64 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
KLHL1Q9NR64 AC123595.1-201ENST00000440769 1046 ntBASIC20.15■□□□□ 0.82
KLHL1Q9NR64 DUX4L2-201ENST00000561772 1275 ntBASIC20.15■□□□□ 0.82
KLHL1Q9NR64 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
KLHL1Q9NR64 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.15■□□□□ 0.82
KLHL1Q9NR64 DUX4L6-201ENST00000626483 1275 ntBASIC20.15■□□□□ 0.82
KLHL1Q9NR64 DUX4L1-201ENST00000627662 1275 ntBASIC20.15■□□□□ 0.82
KLHL1Q9NR64 DUX4L8-201ENST00000629013 1275 ntBASIC20.15■□□□□ 0.82
KLHL1Q9NR64 DUX4L3-201ENST00000630187 1275 ntBASIC20.15■□□□□ 0.82
KLHL1Q9NR64 DUX4L7-201ENST00000630678 1275 ntBASIC20.15■□□□□ 0.82
KLHL1Q9NR64 DUX4L5-201ENST00000630834 1275 ntBASIC20.15■□□□□ 0.82
KLHL1Q9NR64 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL1Q9NR64 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL1Q9NR64 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL1Q9NR64 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL1Q9NR64 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL1Q9NR64 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.15■□□□□ 0.82
KLHL1Q9NR64 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KLHL1Q9NR64 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
KLHL1Q9NR64 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KLHL1Q9NR64 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
KLHL1Q9NR64 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.14■□□□□ 0.81
KLHL1Q9NR64 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 KRT18P5-201ENST00000436075 1291 ntBASIC20.14■□□□□ 0.81
KLHL1Q9NR64 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL1Q9NR64 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 CCDC92B-201ENST00000575506 885 ntBASIC20.13■□□□□ 0.81
KLHL1Q9NR64 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL1Q9NR64 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms