Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.61■■□□□ 1.69
DDX4Q9NQI0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
DDX4Q9NQI0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.6■■□□□ 1.69
DDX4Q9NQI0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.6■■□□□ 1.69
DDX4Q9NQI0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
DDX4Q9NQI0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
DDX4Q9NQI0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.6■■□□□ 1.69
DDX4Q9NQI0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX4Q9NQI0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX4Q9NQI0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DDX4Q9NQI0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.59■■□□□ 1.69
DDX4Q9NQI0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX4Q9NQI0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX4Q9NQI0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.59■■□□□ 1.69
DDX4Q9NQI0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX4Q9NQI0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
DDX4Q9NQI0 AC137767.1-201ENST00000602918 1920 ntBASIC25.59■■□□□ 1.69
DDX4Q9NQI0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX4Q9NQI0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX4Q9NQI0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX4Q9NQI0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX4Q9NQI0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX4Q9NQI0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.58■■□□□ 1.69
DDX4Q9NQI0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX4Q9NQI0 AL109923.1-201ENST00000618799 583 ntBASIC25.58■■□□□ 1.69
DDX4Q9NQI0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
DDX4Q9NQI0 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.58■■□□□ 1.69
DDX4Q9NQI0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX4Q9NQI0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 MYCNOS-205ENST00000641950 531 ntBASIC25.57■■□□□ 1.68
DDX4Q9NQI0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
DDX4Q9NQI0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX4Q9NQI0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX4Q9NQI0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX4Q9NQI0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX4Q9NQI0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX4Q9NQI0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
DDX4Q9NQI0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.56■■□□□ 1.68
DDX4Q9NQI0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX4Q9NQI0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX4Q9NQI0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.56■■□□□ 1.68
DDX4Q9NQI0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
DDX4Q9NQI0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.55■■□□□ 1.68
DDX4Q9NQI0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
DDX4Q9NQI0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.55■■□□□ 1.68
DDX4Q9NQI0 AL355802.2-201ENST00000402069 882 ntBASIC25.55■■□□□ 1.68
DDX4Q9NQI0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.55■■□□□ 1.68
DDX4Q9NQI0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX4Q9NQI0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 AC010141.2-201ENST00000452426 721 ntBASIC25.54■■□□□ 1.68
DDX4Q9NQI0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 AC138907.5-202ENST00000569484 235 ntBASIC25.54■■□□□ 1.68
DDX4Q9NQI0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX4Q9NQI0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 AP006587.3-201ENST00000525742 1516 ntBASIC25.53■■□□□ 1.68
DDX4Q9NQI0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.53■■□□□ 1.68
DDX4Q9NQI0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms