Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
GCM1Q9NP62 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.35■□□□□ 0.53
GCM1Q9NP62 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GCM1Q9NP62 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GCM1Q9NP62 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.34■□□□□ 0.53
GCM1Q9NP62 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.34■□□□□ 0.53
GCM1Q9NP62 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.34■□□□□ 0.53
GCM1Q9NP62 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 AL354811.1-201ENST00000610286 706 ntBASIC18.34■□□□□ 0.53
GCM1Q9NP62 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.34■□□□□ 0.53
GCM1Q9NP62 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.34■□□□□ 0.53
GCM1Q9NP62 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.34■□□□□ 0.53
GCM1Q9NP62 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.34■□□□□ 0.53
GCM1Q9NP62 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GCM1Q9NP62 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCM1Q9NP62 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCM1Q9NP62 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCM1Q9NP62 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
GCM1Q9NP62 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCM1Q9NP62 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCM1Q9NP62 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.33■□□□□ 0.52
GCM1Q9NP62 AC012414.1-201ENST00000556676 535 ntBASIC18.33■□□□□ 0.52
GCM1Q9NP62 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCM1Q9NP62 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCM1Q9NP62 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
GCM1Q9NP62 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCM1Q9NP62 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.33■□□□□ 0.52
GCM1Q9NP62 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCM1Q9NP62 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCM1Q9NP62 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
GCM1Q9NP62 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCM1Q9NP62 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GCM1Q9NP62 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCM1Q9NP62 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GCM1Q9NP62 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCM1Q9NP62 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GCM1Q9NP62 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.32■□□□□ 0.52
GCM1Q9NP62 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.32■□□□□ 0.52
GCM1Q9NP62 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GCM1Q9NP62 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.32■□□□□ 0.52
GCM1Q9NP62 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GCM1Q9NP62 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.32■□□□□ 0.52
GCM1Q9NP62 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.32■□□□□ 0.52
GCM1Q9NP62 SMUG1P1-201ENST00000590640 811 ntBASIC18.32■□□□□ 0.52
GCM1Q9NP62 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCM1Q9NP62 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCM1Q9NP62 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCM1Q9NP62 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.32■□□□□ 0.52
GCM1Q9NP62 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCM1Q9NP62 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.32■□□□□ 0.52
GCM1Q9NP62 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.31■□□□□ 0.52
GCM1Q9NP62 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.31■□□□□ 0.52
GCM1Q9NP62 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.31■□□□□ 0.52
GCM1Q9NP62 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.31■□□□□ 0.52
GCM1Q9NP62 AC127496.7-201ENST00000625110 1798 ntBASIC18.31■□□□□ 0.52
GCM1Q9NP62 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.31■□□□□ 0.52
GCM1Q9NP62 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
GCM1Q9NP62 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GCM1Q9NP62 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.31■□□□□ 0.52
GCM1Q9NP62 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GCM1Q9NP62 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.3■□□□□ 0.52
GCM1Q9NP62 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GCM1Q9NP62 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.3■□□□□ 0.52
GCM1Q9NP62 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.3■□□□□ 0.52
GCM1Q9NP62 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.3■□□□□ 0.52
GCM1Q9NP62 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 LINC00526-201ENST00000581067 1875 ntBASIC18.3■□□□□ 0.52
GCM1Q9NP62 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.3■□□□□ 0.52
GCM1Q9NP62 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms