Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 AC126544.1-201ENST00000580842 1059 ntBASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH18Q9HCL0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH18Q9HCL0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDH18Q9HCL0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH18Q9HCL0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH18Q9HCL0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH18Q9HCL0 EDA-201ENST00000338901 1233 ntBASIC22.34■■□□□ 1.17
PCDH18Q9HCL0 AP001330.3-201ENST00000520123 633 ntBASIC22.34■■□□□ 1.17
PCDH18Q9HCL0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDH18Q9HCL0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH18Q9HCL0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH18Q9HCL0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH18Q9HCL0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH18Q9HCL0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH18Q9HCL0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH18Q9HCL0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH18Q9HCL0 AC099791.1-201ENST00000416440 715 ntBASIC22.33■■□□□ 1.17
PCDH18Q9HCL0 AL031432.3-201ENST00000607698 485 ntBASIC22.33■■□□□ 1.17
PCDH18Q9HCL0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDH18Q9HCL0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDH18Q9HCL0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDH18Q9HCL0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 IGHV3-19-201ENST00000521488 291 ntBASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 AC027682.1-201ENST00000562846 899 ntBASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH18Q9HCL0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 AC026471.6-201ENST00000622954 1905 ntBASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 AL355001.2-201ENST00000620617 1191 ntBASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH18Q9HCL0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH18Q9HCL0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH18Q9HCL0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH18Q9HCL0 AF213884.3-201ENST00000563833 479 ntBASIC22.3■■□□□ 1.16
PCDH18Q9HCL0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH18Q9HCL0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH18Q9HCL0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH18Q9HCL0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH18Q9HCL0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH18Q9HCL0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 MIR939-201ENST00000401314 82 ntBASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 AL139246.5-201ENST00000606645 996 ntBASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PCDH18Q9HCL0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 SMUG1P1-201ENST00000590640 811 ntBASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH18Q9HCL0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms