Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC244015.2-201ENST00000616358 1861 ntBASIC20.62■□□□□ 0.89
BRF2Q9HAW0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 AC008406.3-201ENST00000620001 1374 ntBASIC20.61■□□□□ 0.89
BRF2Q9HAW0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 AL136162.1-201ENST00000607711 1078 ntBASIC20.61■□□□□ 0.89
BRF2Q9HAW0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRF2Q9HAW0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 AC135279.3-201ENST00000610945 1311 ntBASIC20.6■□□□□ 0.89
BRF2Q9HAW0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 AC024257.2-201ENST00000549699 147 ntBASIC20.6■□□□□ 0.89
BRF2Q9HAW0 AC233992.3-201ENST00000607491 485 ntBASIC20.6■□□□□ 0.89
BRF2Q9HAW0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRF2Q9HAW0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRF2Q9HAW0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.58■□□□□ 0.89
BRF2Q9HAW0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.58■□□□□ 0.89
BRF2Q9HAW0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRF2Q9HAW0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRF2Q9HAW0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.58■□□□□ 0.89
BRF2Q9HAW0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.58■□□□□ 0.89
BRF2Q9HAW0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRF2Q9HAW0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
BRF2Q9HAW0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.58■□□□□ 0.89
BRF2Q9HAW0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRF2Q9HAW0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 AC133561.4-201ENST00000566112 224 ntBASIC20.57■□□□□ 0.88
BRF2Q9HAW0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.57■□□□□ 0.88
BRF2Q9HAW0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 AC007375.3-201ENST00000600936 2314 ntBASIC20.56■□□□□ 0.88
BRF2Q9HAW0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRF2Q9HAW0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms