Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 AL136162.1-201ENST00000607711 1078 ntBASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 AC010542.4-201ENST00000563151 1910 ntBASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 BX842568.3-201ENST00000418104 571 ntBASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 AC024257.2-201ENST00000549699 147 ntBASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC40Q9H9A6 AC007375.3-201ENST00000600936 2314 ntBASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 AC135279.3-201ENST00000610945 1311 ntBASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 PKD1P6-201ENST00000343738 4769 ntBASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC40Q9H9A6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC40Q9H9A6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.85■■□□□ 1.09
LRRC40Q9H9A6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.85■■□□□ 1.09
LRRC40Q9H9A6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC40Q9H9A6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC40Q9H9A6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC40Q9H9A6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC40Q9H9A6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC40Q9H9A6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 AC233992.3-201ENST00000607491 485 ntBASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC40Q9H9A6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
LRRC40Q9H9A6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LRRC40Q9H9A6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRRC40Q9H9A6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRRC40Q9H9A6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC40Q9H9A6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC40Q9H9A6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.82■■□□□ 1.08
LRRC40Q9H9A6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.82■■□□□ 1.08
LRRC40Q9H9A6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LRRC40Q9H9A6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LRRC40Q9H9A6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC40Q9H9A6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC40Q9H9A6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.82■■□□□ 1.08
LRRC40Q9H9A6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.82■■□□□ 1.08
LRRC40Q9H9A6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 AC096631.2-201ENST00000436136 790 ntBASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
LRRC40Q9H9A6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms