Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AL035685.1-201ENST00000636663 812 ntBASIC20.49■□□□□ 0.87
PIF1Q9H611 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PIF1Q9H611 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PIF1Q9H611 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PIF1Q9H611 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PIF1Q9H611 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PIF1Q9H611 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PIF1Q9H611 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.48■□□□□ 0.87
PIF1Q9H611 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.48■□□□□ 0.87
PIF1Q9H611 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PIF1Q9H611 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PIF1Q9H611 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.48■□□□□ 0.87
PIF1Q9H611 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.48■□□□□ 0.87
PIF1Q9H611 CA15P2-201ENST00000611168 834 ntBASIC20.48■□□□□ 0.87
PIF1Q9H611 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.48■□□□□ 0.87
PIF1Q9H611 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PIF1Q9H611 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.48■□□□□ 0.87
PIF1Q9H611 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PIF1Q9H611 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PIF1Q9H611 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.47■□□□□ 0.87
PIF1Q9H611 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PIF1Q9H611 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PIF1Q9H611 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PIF1Q9H611 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
PIF1Q9H611 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.47■□□□□ 0.87
PIF1Q9H611 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PIF1Q9H611 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PIF1Q9H611 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
PIF1Q9H611 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PIF1Q9H611 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PIF1Q9H611 Z98882.1-201ENST00000622160 2253 ntBASIC20.47■□□□□ 0.87
PIF1Q9H611 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PIF1Q9H611 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PIF1Q9H611 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.46■□□□□ 0.87
PIF1Q9H611 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PIF1Q9H611 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PIF1Q9H611 AC073130.3-201ENST00000624389 2278 ntBASIC20.46■□□□□ 0.87
PIF1Q9H611 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.46■□□□□ 0.87
PIF1Q9H611 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PIF1Q9H611 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PIF1Q9H611 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.46■□□□□ 0.87
PIF1Q9H611 MIR4787-201ENST00000607364 84 ntBASIC20.46■□□□□ 0.87
PIF1Q9H611 AC092028.1-203ENST00000608262 953 ntBASIC20.46■□□□□ 0.87
PIF1Q9H611 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PIF1Q9H611 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PIF1Q9H611 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PIF1Q9H611 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
PIF1Q9H611 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
PIF1Q9H611 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PIF1Q9H611 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PIF1Q9H611 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PIF1Q9H611 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PIF1Q9H611 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PIF1Q9H611 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.45■□□□□ 0.86
PIF1Q9H611 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PIF1Q9H611 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.45■□□□□ 0.86
PIF1Q9H611 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PIF1Q9H611 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.45■□□□□ 0.86
PIF1Q9H611 AC239859.2-201ENST00000444165 318 ntBASIC20.45■□□□□ 0.86
PIF1Q9H611 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PIF1Q9H611 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PIF1Q9H611 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PIF1Q9H611 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PIF1Q9H611 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PIF1Q9H611 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
PIF1Q9H611 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.45■□□□□ 0.86
PIF1Q9H611 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
PIF1Q9H611 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PIF1Q9H611 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.44■□□□□ 0.86
PIF1Q9H611 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PIF1Q9H611 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PIF1Q9H611 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PIF1Q9H611 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PIF1Q9H611 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.44■□□□□ 0.86
PIF1Q9H611 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.44■□□□□ 0.86
PIF1Q9H611 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PIF1Q9H611 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PIF1Q9H611 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PIF1Q9H611 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PIF1Q9H611 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PIF1Q9H611 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.43■□□□□ 0.86
PIF1Q9H611 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PIF1Q9H611 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PIF1Q9H611 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PIF1Q9H611 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.43■□□□□ 0.86
PIF1Q9H611 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PIF1Q9H611 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms