Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATXN3LQ9H3M9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.64■■□□□ 1.21
ATXN3LQ9H3M9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
ATXN3LQ9H3M9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATXN3LQ9H3M9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATXN3LQ9H3M9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.64■■□□□ 1.21
ATXN3LQ9H3M9 AC073111.5-205ENST00000641717 521 ntBASIC22.64■■□□□ 1.21
ATXN3LQ9H3M9 LINC01960-201ENST00000563759 1884 ntBASIC22.64■■□□□ 1.21
ATXN3LQ9H3M9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATXN3LQ9H3M9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATXN3LQ9H3M9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 CDCA4P2-201ENST00000441182 718 ntBASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATXN3LQ9H3M9 ESRRAP2-201ENST00000418437 1549 ntBASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 AC068473.5-201ENST00000616428 2072 ntBASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATXN3LQ9H3M9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATXN3LQ9H3M9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 HLA-L-209ENST00000420110 1011 ntBASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
ATXN3LQ9H3M9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 KRT18P11-201ENST00000435214 1283 ntBASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 AC079089.2-201ENST00000531211 1277 ntBASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 RAP2CP1-201ENST00000605103 478 ntBASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
ATXN3LQ9H3M9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ATXN3LQ9H3M9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ATXN3LQ9H3M9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ATXN3LQ9H3M9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ATXN3LQ9H3M9 AC026185.1-201ENST00000445748 174 ntBASIC22.58■■□□□ 1.21
ATXN3LQ9H3M9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.58■■□□□ 1.21
ATXN3LQ9H3M9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ATXN3LQ9H3M9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
ATXN3LQ9H3M9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
ATXN3LQ9H3M9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.57■■□□□ 1.2
ATXN3LQ9H3M9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ATXN3LQ9H3M9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ATXN3LQ9H3M9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.57■■□□□ 1.2
ATXN3LQ9H3M9 AC104187.1-201ENST00000607510 612 ntBASIC22.57■■□□□ 1.2
ATXN3LQ9H3M9 KRT87P-202ENST00000534226 1464 ntBASIC22.57■■□□□ 1.2
ATXN3LQ9H3M9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
ATXN3LQ9H3M9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ATXN3LQ9H3M9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.57■■□□□ 1.2
ATXN3LQ9H3M9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms