Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 AFG3L1P-217ENST00000557444 2447 ntBASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
KCNF1Q9H3M0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNF1Q9H3M0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
KCNF1Q9H3M0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KCNF1Q9H3M0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.52■■□□□ 1.36
KCNF1Q9H3M0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KCNF1Q9H3M0 DUX4L4-201ENST00000566884 1269 ntBASIC23.52■■□□□ 1.36
KCNF1Q9H3M0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.52■■□□□ 1.36
KCNF1Q9H3M0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KCNF1Q9H3M0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.52■■□□□ 1.36
KCNF1Q9H3M0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
KCNF1Q9H3M0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KCNF1Q9H3M0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNF1Q9H3M0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNF1Q9H3M0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.51■■□□□ 1.35
KCNF1Q9H3M0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNF1Q9H3M0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNF1Q9H3M0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNF1Q9H3M0 AC129492.7-201ENST00000622992 756 ntBASIC23.51■■□□□ 1.35
KCNF1Q9H3M0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.51■■□□□ 1.35
KCNF1Q9H3M0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
KCNF1Q9H3M0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.5■■□□□ 1.35
KCNF1Q9H3M0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
KCNF1Q9H3M0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNF1Q9H3M0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
KCNF1Q9H3M0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNF1Q9H3M0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNF1Q9H3M0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.5■■□□□ 1.35
KCNF1Q9H3M0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.5■■□□□ 1.35
KCNF1Q9H3M0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.5■■□□□ 1.35
KCNF1Q9H3M0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
KCNF1Q9H3M0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNF1Q9H3M0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KCNF1Q9H3M0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNF1Q9H3M0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.49■■□□□ 1.35
KCNF1Q9H3M0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.49■■□□□ 1.35
KCNF1Q9H3M0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNF1Q9H3M0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.49■■□□□ 1.35
KCNF1Q9H3M0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNF1Q9H3M0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNF1Q9H3M0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 SNX5-217ENST00000606557 1087 ntBASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
KCNF1Q9H3M0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 PCDHAC2-203ENST00000615316 3011 ntBASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 AP005212.1-201ENST00000581547 1997 ntBASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.47■■□□□ 1.35
KCNF1Q9H3M0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
KCNF1Q9H3M0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KCNF1Q9H3M0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KCNF1Q9H3M0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.46■■□□□ 1.35
KCNF1Q9H3M0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.46■■□□□ 1.35
KCNF1Q9H3M0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.46■■□□□ 1.35
KCNF1Q9H3M0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
KCNF1Q9H3M0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms