Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CDH23Q9H251 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CDH23Q9H251 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH23Q9H251 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.19■■□□□ 1.3
CDH23Q9H251 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
CDH23Q9H251 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 AL445228.2-201ENST00000605589 952 ntBASIC23.19■■□□□ 1.3
CDH23Q9H251 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH23Q9H251 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.18■■□□□ 1.3
CDH23Q9H251 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CDH23Q9H251 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.18■■□□□ 1.3
CDH23Q9H251 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.18■■□□□ 1.3
CDH23Q9H251 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDH23Q9H251 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
CDH23Q9H251 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.18■■□□□ 1.3
CDH23Q9H251 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CDH23Q9H251 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDH23Q9H251 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.18■■□□□ 1.3
CDH23Q9H251 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDH23Q9H251 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDH23Q9H251 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDH23Q9H251 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDH23Q9H251 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CDH23Q9H251 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.17■■□□□ 1.3
CDH23Q9H251 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.17■■□□□ 1.3
CDH23Q9H251 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH23Q9H251 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH23Q9H251 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.17■■□□□ 1.3
CDH23Q9H251 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH23Q9H251 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CDH23Q9H251 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CDH23Q9H251 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.16■■□□□ 1.3
CDH23Q9H251 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDH23Q9H251 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH23Q9H251 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH23Q9H251 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CDH23Q9H251 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.16■■□□□ 1.3
CDH23Q9H251 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDH23Q9H251 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.16■■□□□ 1.3
CDH23Q9H251 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDH23Q9H251 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH23Q9H251 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH23Q9H251 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.15■■□□□ 1.3
CDH23Q9H251 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDH23Q9H251 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.15■■□□□ 1.3
CDH23Q9H251 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDH23Q9H251 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDH23Q9H251 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.15■■□□□ 1.3
CDH23Q9H251 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDH23Q9H251 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDH23Q9H251 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDH23Q9H251 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
CDH23Q9H251 AC004812.2-201ENST00000611079 2094 ntBASIC23.14■■□□□ 1.3
CDH23Q9H251 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.14■■□□□ 1.29
CDH23Q9H251 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDH23Q9H251 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.14■■□□□ 1.29
CDH23Q9H251 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.14■■□□□ 1.29
CDH23Q9H251 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.14■■□□□ 1.29
CDH23Q9H251 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.14■■□□□ 1.29
CDH23Q9H251 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.14■■□□□ 1.29
CDH23Q9H251 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.14■■□□□ 1.29
CDH23Q9H251 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.13■■□□□ 1.29
CDH23Q9H251 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDH23Q9H251 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.13■■□□□ 1.29
CDH23Q9H251 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CDH23Q9H251 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
CDH23Q9H251 AC091874.3-201ENST00000512672 1195 ntBASIC23.13■■□□□ 1.29
CDH23Q9H251 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.13■■□□□ 1.29
CDH23Q9H251 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CDH23Q9H251 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.13■■□□□ 1.29
CDH23Q9H251 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.12■■□□□ 1.29
CDH23Q9H251 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDH23Q9H251 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.12■■□□□ 1.29
CDH23Q9H251 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.12■■□□□ 1.29
CDH23Q9H251 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDH23Q9H251 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.12■■□□□ 1.29
CDH23Q9H251 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDH23Q9H251 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.12■■□□□ 1.29
CDH23Q9H251 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.12■■□□□ 1.29
CDH23Q9H251 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDH23Q9H251 AP001160.3-201ENST00000601484 763 ntBASIC23.12■■□□□ 1.29
CDH23Q9H251 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDH23Q9H251 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDH23Q9H251 RCN1P1-201ENST00000400413 996 ntBASIC23.12■■□□□ 1.29
CDH23Q9H251 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.12■■□□□ 1.29
CDH23Q9H251 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.12■■□□□ 1.29
CDH23Q9H251 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.12■■□□□ 1.29
CDH23Q9H251 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.11■■□□□ 1.29
CDH23Q9H251 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDH23Q9H251 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.11■■□□□ 1.29
CDH23Q9H251 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms