Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPBQ9H078 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLPBQ9H078 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPBQ9H078 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPBQ9H078 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLPBQ9H078 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPBQ9H078 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 AC080038.3-201ENST00000623346 1952 ntBASIC21.61■■□□□ 1.05
CLPBQ9H078 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.61■■□□□ 1.05
CLPBQ9H078 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.61■■□□□ 1.05
CLPBQ9H078 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
CLPBQ9H078 ECEL1P1-201ENST00000373592 1742 ntBASIC21.61■■□□□ 1.05
CLPBQ9H078 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CLPBQ9H078 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.61■■□□□ 1.05
CLPBQ9H078 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.61■■□□□ 1.05
CLPBQ9H078 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.61■■□□□ 1.05
CLPBQ9H078 AC087239.1-201ENST00000622671 572 ntBASIC21.61■■□□□ 1.05
CLPBQ9H078 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.61■■□□□ 1.05
CLPBQ9H078 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CLPBQ9H078 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPBQ9H078 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLPBQ9H078 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLPBQ9H078 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLPBQ9H078 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.6■■□□□ 1.05
CLPBQ9H078 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLPBQ9H078 AC022517.1-201ENST00000592429 346 ntBASIC21.6■■□□□ 1.05
CLPBQ9H078 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.6■■□□□ 1.05
CLPBQ9H078 IKBKGP1-201ENST00000612193 1073 ntBASIC21.6■■□□□ 1.05
CLPBQ9H078 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.6■■□□□ 1.05
CLPBQ9H078 AC105233.4-201ENST00000642045 216 ntBASIC21.6■■□□□ 1.05
CLPBQ9H078 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLPBQ9H078 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLPBQ9H078 AC137767.1-201ENST00000602918 1920 ntBASIC21.6■■□□□ 1.05
CLPBQ9H078 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLPBQ9H078 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.6■■□□□ 1.05
CLPBQ9H078 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLPBQ9H078 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.59■■□□□ 1.05
CLPBQ9H078 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPBQ9H078 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPBQ9H078 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPBQ9H078 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLPBQ9H078 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPBQ9H078 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPBQ9H078 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CLPBQ9H078 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPBQ9H078 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLPBQ9H078 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CLPBQ9H078 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
CLPBQ9H078 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPBQ9H078 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CLPBQ9H078 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.58■■□□□ 1.05
CLPBQ9H078 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLPBQ9H078 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CLPBQ9H078 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLPBQ9H078 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.58■■□□□ 1.05
CLPBQ9H078 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.58■■□□□ 1.05
CLPBQ9H078 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.58■■□□□ 1.05
CLPBQ9H078 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.58■■□□□ 1.05
CLPBQ9H078 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.58■■□□□ 1.04
CLPBQ9H078 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLPBQ9H078 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLPBQ9H078 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.57■■□□□ 1.04
CLPBQ9H078 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLPBQ9H078 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CLPBQ9H078 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLPBQ9H078 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.57■■□□□ 1.04
CLPBQ9H078 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
CLPBQ9H078 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CLPBQ9H078 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLPBQ9H078 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.57■■□□□ 1.04
CLPBQ9H078 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.57■■□□□ 1.04
CLPBQ9H078 TERF1P2-201ENST00000583350 1212 ntBASIC21.57■■□□□ 1.04
CLPBQ9H078 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLPBQ9H078 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLPBQ9H078 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLPBQ9H078 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLPBQ9H078 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.56■■□□□ 1.04
CLPBQ9H078 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLPBQ9H078 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLPBQ9H078 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.56■■□□□ 1.04
CLPBQ9H078 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLPBQ9H078 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLPBQ9H078 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLPBQ9H078 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.56■■□□□ 1.04
CLPBQ9H078 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.56■■□□□ 1.04
CLPBQ9H078 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.56■■□□□ 1.04
CLPBQ9H078 KRT18P14-201ENST00000534205 1250 ntBASIC21.56■■□□□ 1.04
CLPBQ9H078 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.56■■□□□ 1.04
CLPBQ9H078 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.56■■□□□ 1.04
CLPBQ9H078 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms